RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 GALNT15Q8N3T1 639 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 CNTD1Q8N815 330 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 LRRC57Q8N9N7 239 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 LPCAT1Q8NF37 534 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 LMX1AQ8TE12 382 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 WDR92Q96MX6 357 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 AGAP3Q96P47 875 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 LRRC61Q9BV99 259 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 EVA1BQ9NVM1 165 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 SAE1Q9UBE0 346 aaPredicted RBP17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 KLQ9UEF7 1012 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 PCDHA3Q9Y5H8 950 aa17.25■□□□□ 0.35
CHMP1A-208ENST00000550102 MACROD2A1Z1Q3 448 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 FAM221BA6H8Z2 402 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 K7ESM1 405 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 RASGRP1O95267 797 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 MMP2P08253 660 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 GIMD1P0DJR0 217 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 TSHRP16473 764 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 ZNF30P17039 623 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 KELP23276 732 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 CTNNA2P26232 953 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 HNF1BP35680 557 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 SKOR1P84550 965 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 ILKQ13418 452 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 PTPRRQ15256 657 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 ALG11Q2TAA5 492 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 LRRC66Q68CR7 880 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 ZCCHC8Q6NZY4 707 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 DHRS13Q6UX07 377 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 UNQ6494/PRO21346Q6UXR6 183 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 HAUS1Q96CS2 278 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 IMP4Q96G21 291 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 QKIQ96PU8 341 aaKnown RBP eCLIP17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 ADGRE3Q9BY15 652 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 TCEAL2Q9H3H9 227 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 NCKIPSDQ9NZQ3 722 aa17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 PNMA8BQ9ULN7 279 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 KMT2BQ9UMN6 2715 aaPredicted RBP17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 ZFC3H1O60293 1989 aaKnown RBP17.24■□□□□ 0.35
CHMP1A-208ENST00000550102 APOC4-APOC2K7ER74 178 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 PRLP01236 227 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 APOC2P02655 101 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 HOXC4P09017 264 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 ACP1P24666 158 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 PTPN7P35236 360 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 ETV3P41162 512 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 HK3P52790 923 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 RWDD2BP57060 319 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 ADCY2Q08462 1091 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 SLC14A2Q15849 920 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 CCDC181Q5TID7 509 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 PNCKQ6P2M8 343 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 CRTC1Q6UUV9 634 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 ENPP7Q6UWV6 458 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 Q6ZVL8 140 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 B4GALNT4Q76KP1 1039 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 NT5DC3Q86UY8 548 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 HID1Q8IV36 788 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 SYCE1Q8N0S2 351 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 FSTL5Q8N475 847 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 FAM181AQ8N9Y4 354 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 GATA6Q92908 595 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 FUBP1Q96AE4 644 aaKnown RBP17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 PDXPQ96GD0 296 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 RBM15Q96T37 977 aaKnown RBP eCLIP17.23■□□□□ 0.359e-7■■■□□ 19
CHMP1A-208ENST00000550102 SLC25A51Q9H1U9 297 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 USP29Q9HBJ7 922 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 PHPT1Q9NRX4 125 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 TRIM10Q9UDY6 481 aa17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 ANKRD11Q6UB99 2663 aaPredicted RBP17.23■□□□□ 0.35
CHMP1A-208ENST00000550102 GOLGA6CA6NDK9 693 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 GOLGA6BA6NDN3 693 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 HACD1B0YJ81 288 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 LMO7DNF2Z398 122 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 PDE2AO00408 941 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 TPP1O14773 563 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 GOLGA6DP0CG33 693 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 MYCLP1P12525 358 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 CKMT1AP12532 417 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 PTPN3P26045 913 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 TRIM23P36406 574 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 CETN2P41208 172 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 STC1P52823 247 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 SRP54P61011 504 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 SMAD1Q15797 465 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 DEFB133Q30KQ1 61 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 TEX44Q53QW1 395 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 RAET1GQ6H3X3 334 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 TMPRSS7Q7RTY8 843 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 PEX26Q7Z412 305 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 ZC3H18Q86VM9 953 aaKnown RBP17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 HEATR4Q86WZ0 1026 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 CBARPQ8N350 705 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 OR56A4Q8NGH8 313 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 TSACCQ96A04 125 aaPredicted RBP17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 APOLD1Q96LR9 279 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 SMIM14Q96QK8 99 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 LYSMD1Q96S90 227 aa17.22■□□□□ 0.35
CHMP1A-208ENST00000550102 HEMGNQ9BXL5 484 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms