RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 TRAFD1O14545 582 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PEX11BO96011 259 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CYP1A2P05177 515 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CD48P09326 243 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 GOLGA6DP0CG33 693 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CTPS1P17812 591 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 KELP23276 732 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 IL4RP24394 825 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 GJC1P36383 396 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PBX1P40424 430 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 MMP13P45452 471 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CDH6P55285 790 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CCL7P80098 99 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 TLE3Q04726 772 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 SPIDRQ14159 915 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PTPRRQ15256 657 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 ATP13A4Q4VNC1 1196 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PNCKQ6P2M8 343 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 LVRNQ6Q4G3 990 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 RBM44Q6ZP01 1051 aaKnown RBP6.72□□□□□ -1.33
SCAF11-211ENST00000547950 DPPA4Q7L190 304 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 TAF8Q7Z7C8 310 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 SPACA3Q8IXA5 215 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 BBS5Q8N3I7 341 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PGBD5Q8N414 524 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 ATPAF2Q8N5M1 289 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 ARL10Q8N8L6 244 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 KYQ8NBH2 561 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 KCTD6Q8NC69 237 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 ZNF248Q8NDW4 579 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 OR56A4Q8NGH8 313 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PCDH19Q8TAB3 1148 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 TEKT4Q8WW24 435 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 OR1E3Q8WZA6 343 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 NAT6Q93015 286 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 TBATAQ96M53 351 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 ZNF578Q96N58 590 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-211ENST00000547950 FCRL3Q96P31 734 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-211ENST00000547950 BBC3Q96PG8 261 aaPredicted RBP6.72□□□□□ -1.33
SCAF11-211ENST00000547950 NUDCD1Q96RS6 583 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 LGMNQ99538 433 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 LGR4Q9BXB1 951 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 TMEM168Q9H0V1 697 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 DPEP2Q9H4A9 486 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PCDH18Q9HCL0 1135 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CYP4F12Q9HCS2 524 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 NT5MQ9NPB1 228 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 MRPL40Q9NQ50 206 aaKnown RBP6.72□□□□□ -1.33
SCAF11-211ENST00000547950 GOLGA6AQ9NYA3 693 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 CTTNBP2NLQ9P2B4 639 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 B4GALT6Q9UBX8 382 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 PHTF1Q9UMS5 762 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 ENTPD2Q9Y5L3 495 aa6.72□□□□□ -1.33
SCAF11-211ENST00000547950 A0A0U1RQS6 177 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 A0A1W2PNU3 283 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 PMS2P1A4D2B8 440 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 B4DGG1 531 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 PDE2AO00408 941 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 KLK10O43240 276 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 HTRA2O43464 458 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 TNFSF15O95150 251 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 MAP3K6O95382 1288 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 ZIC2O95409 532 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 CPP00450 1065 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 GYPCP04921 128 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 GM2AP17900 193 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 CASP14P31944 242 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 VIPR1P32241 457 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 TRIM23P36406 574 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 GMPRP36959 345 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 HSPA9P38646 679 aaKnown RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 ETV3P41162 512 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 PCBP4P57723 403 aaKnown RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 CXADRP78310 365 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 SLC25A11Q02978 314 aaKnown RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 TRAF2Q12933 501 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 ARHGEF7Q14155 803 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 HADHQ16836 314 aaKnown RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 ZFYVE27Q5T4F4 411 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 ARMC12Q5T9G4 340 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 BROXQ5VW32 411 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 Q6ZVL8 140 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 HSD11B1LQ7Z5J1 315 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 BPHLQ86WA6 291 aaPredicted RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 CPNE8Q86YQ8 564 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 SFTPA2Q8IWL1 248 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 PELI3Q8N2H9 469 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 SDR16C5Q8N3Y7 309 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 NIPA2Q8N8Q9 360 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 CCL4L1Q8NHW4 92 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 LRRN4Q8WUT4 740 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 CCDC74AQ96AQ1 378 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 GRAMD1AQ96CP6 724 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 NUS1Q96E22 293 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 PDXPQ96GD0 296 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 COQ10AQ96MF6 247 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 SLC46A1Q96NT5 459 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 SMIM14Q96QK8 99 aa6.71□□□□□ -1.34
SCAF11-211ENST00000547950 GFM1Q96RP9 751 aaKnown RBP6.71□□□□□ -1.34
SCAF11-211ENST00000547950 RBM15Q96T37 977 aaKnown RBP eCLIP6.71□□□□□ -1.343e-7■□□□□ 9.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms