RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TRBC1P01850 177 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 SERPINE1P05121 402 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 PDHA1P08559 390 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 MYL2P10916 166 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 SAT1P21673 171 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 GABRB3P28472 473 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 PBX2P40425 430 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 PTGER3P43115 390 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 STC1P52823 247 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 CACNG1Q06432 222 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 IFT88Q13099 833 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 ZKSCAN8Q15776 578 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-215ENST00000547672 TYSND1Q2T9J0 566 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 FUT11Q495W5 492 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 GPR33Q49SQ1 333 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 DGKKQ5KSL6 1271 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 ANKRD54Q6NXT1 300 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 C6orf89Q6UWU4 347 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 CDHR3Q6ZTQ4 885 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 CAMK1DQ8IU85 385 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 RNF135Q8IUD6 432 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 NPAS3Q8IXF0 933 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 CPA6Q8N4T0 437 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 UCMAQ8WVF2 138 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 FGF13Q92913 245 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 ASIC4Q96FT7 647 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 SCYL1Q96KG9 808 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 RIPOR3Q96MK2 946 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 LYSMD1Q96S90 227 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 OMDQ99983 421 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 HEPHQ9BQS7 1158 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 TUBB6Q9BUF5 446 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 IGFLR1Q9H665 355 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 CERS4Q9HA82 394 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 FBXO6Q9NRD1 293 aaPredicted RBP13.45□□□□□ -0.26
PTCH1-215ENST00000547672 TAS2R13Q9NYV9 303 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 DEC1Q9P2X7 70 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 COPG2Q9UBF2 871 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 GGT7Q9UJ14 662 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 ZNF711Q9Y462 761 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 WNT6Q9Y6F9 365 aa13.45□□□□□ -0.26
PTCH1-215ENST00000547672 NUP210Q8TEM1 1887 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 TMEM114B3SHH9 223 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 K7ERQ8 282 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 TRAFD1O14545 582 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 TRIM13O60858 407 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 DLDP09622 509 aaKnown RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 LTA4HP09960 611 aaKnown RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 RALBP11234 206 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 CYP2A6P11509 494 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 BGNP21810 368 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 SERPINB5P36952 375 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 CSRP3P50461 194 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 ARSDP51689 593 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 ADARP55265 1226 aaKnown RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 NAA20P61599 178 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 MPP1Q00013 466 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 ACAP2Q15057 778 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 CHI3L2Q15782 390 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 EML3Q32P44 896 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 PPM1JQ5JR12 505 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 FAM78AQ5JUQ0 283 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 HECTD2Q5U5R9 776 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 GDPD4Q6W3E5 623 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 TPRG1Q6ZUI0 275 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 FAM47EQ6ZV65 393 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 ADIPOR2Q86V24 386 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 SLC41A1Q8IVJ1 513 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 WDR75Q8IWA0 830 aaKnown RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 TTC30BQ8N4P2 665 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 C12orf76Q8N812 135 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 MDGA1Q8NFP4 955 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 OR13C4Q8NGS5 318 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 TIFAQ96CG3 184 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 SCRN2Q96FV2 425 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 CDH19Q9H159 772 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 MRPL46Q9H2W6 279 aaKnown RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 ACTR5Q9H9F9 607 aaPredicted RBP13.44□□□□□ -0.26
PTCH1-215ENST00000547672 GPAMQ9HCL2 828 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 TMEM216Q9P0N5 145 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 PCDH10Q9P2E7 1040 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 CLEC4EQ9ULY5 219 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 PCDHB1Q9Y5F3 818 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 SPO11Q9Y5K1 396 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 GBF1Q92538 1859 aa13.44□□□□□ -0.26
PTCH1-215ENST00000547672 CAPN8A6NHC0 703 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 HEPACAM2A8MVW5 462 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 GJB3O75712 270 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 ATP5HO75947 161 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 ESR1P03372 595 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 CYP17A1P05093 508 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 PIRTP0C851 137 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 SLC35E2BP0CK96 405 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 ZNF30P17039 623 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 ITGALP20701 1170 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 SLC8A1P32418 973 aa13.43□□□□□ -0.26
PTCH1-215ENST00000547672 MTHFRP42898 656 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms