RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 RANBP10Q6VN20 620 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 KIAA0408Q6ZU52 694 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 SPRED1Q7Z699 444 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 TBC1D15Q8TC07 691 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 SEPT8Q92599 483 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 RNF34Q969K3 372 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 L3HYPDHQ96EM0 354 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 CENPNQ96H22 339 aaPredicted RBP12.7□□□□□ -0.38
CACNB3-204ENST00000547230 FEM1CQ96JP0 617 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 MYRFLQ96LU7 910 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 DOK1Q99704 481 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 POLR1BQ9H9Y6 1135 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 DSEQ9UL01 958 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 SH3GLB1Q9Y371 365 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 ZNF711Q9Y462 761 aa12.7□□□□□ -0.38
CACNB3-204ENST00000547230 PPP6CO00743 305 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 CLOCKO15516 846 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 RASAL1O95294 804 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 MMP3P08254 477 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 SLC6A2P23975 617 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 LEPRP48357 1165 aaKnown RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 CD97P48960 835 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 CDKN2DP55273 166 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 TNK2Q07912 1038 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PCSK7Q16549 785 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 FGD3Q5JSP0 725 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 LDB1Q86U70 411 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PIM3Q86V86 326 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 EXT2Q93063 718 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 HDAC10Q969S8 669 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 THAP11Q96EK4 314 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 RPL10LQ96L21 214 aaKnown RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 HOPXQ9BPY8 73 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 TRMOQ9BU70 441 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 SLC39A8Q9C0K1 460 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PAIP1Q9H074 479 aaKnown RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 KATNBL1Q9H079 304 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 SOX17Q9H6I2 414 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 VTA1Q9NP79 307 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 NDFIP2Q9NV92 336 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 SLC38A7Q9NVC3 462 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 TBC1D13Q9NVG8 400 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 ACTR3BQ9P1U1 418 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 FADS3Q9Y5Q0 445 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 DNAJC15Q9Y5T4 150 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 DICER1Q9UPY3 1922 aaKnown RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 RBM47A0AV96 593 aaKnown RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 ADM5C9JUS6 153 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PTGESO14684 152 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 MATN3O15232 486 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 WISP3O95389 354 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 MTHFD1P11586 935 aaKnown RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 GFAPP14136 432 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 MAGEA8P43361 318 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PSMD7P51665 324 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 SH3BP2P78314 561 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 SFSWAPQ12872 951 aaKnown RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 BNIP2Q12982 314 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 CBX3Q13185 183 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PRMT9Q6P2P2 845 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 XKR5Q6UX68 686 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 MINDY1Q8N5J2 469 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 ZNF420Q8TAQ5 688 aaPredicted RBP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PTERQ96BW5 349 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 TSPAN17Q96FV3 270 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PRKD2Q9BZL6 878 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 TBC1D23Q9NUY8 699 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 RBM22Q9NW64 420 aaKnown RBP eCLIP12.69□□□□□ -0.38
CACNB3-204ENST00000547230 NDUFAF1Q9Y375 327 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 IPPQ9Y573 584 aa12.69□□□□□ -0.38
CACNB3-204ENST00000547230 PLXNB2O15031 1838 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 TTC24A2A3L6 582 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-204ENST00000547230 LRRC14BA6NHZ5 514 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 CCL22O00626 93 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 PIP5K1BO14986 540 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 ANGPT2O15123 496 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 SUPT3HO75486 399 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 INHBBP09529 407 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 YAP1P46937 504 aaKnown RBP12.68□□□□□ -0.38
CACNB3-204ENST00000547230 APLP1P51693 650 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 FOXA1P55317 472 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 ZNF792Q3KQV3 632 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 ABRAXAS1Q6UWZ7 409 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 KCTD8Q6ZWB6 473 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 MOB2Q70IA6 237 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 CHST15Q7LFX5 561 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-204ENST00000547230 ISCA2Q86U28 154 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 PHYKPLQ8IUZ5 450 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 MIER2Q8N344 545 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 SMG8Q8ND04 991 aaKnown RBP12.68□□□□□ -0.38
CACNB3-204ENST00000547230 DQX1Q8TE96 717 aaKnown RBP12.68□□□□□ -0.38
CACNB3-204ENST00000547230 TANKQ92844 425 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 BORCS5Q969J3 196 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 SENP8Q96LD8 212 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
CACNB3-204ENST00000547230 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-204ENST00000547230 COL4A4P53420 1690 aaPredicted RBP12.68□□□□□ -0.38
CACNB3-204ENST00000547230 CDK14O94921 469 aa12.67□□□□□ -0.38
CACNB3-204ENST00000547230 SIX3O95343 332 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms