RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 ANXA8L1Q5VT79 327 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PEG10Q86TG7 708 aaKnown RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 C7orf43Q8WVR3 580 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PDCD2LQ9BRP1 358 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 SNRNP25Q9BV90 132 aaKnown RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 KIFC1Q9BW19 673 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 OR2B2Q9GZK3 357 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ALG2Q9H553 416 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ALG9Q9H6U8 611 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 NT5MQ9NPB1 228 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 EMC3Q9P0I2 261 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 SCAF8Q9UPN6 1271 aaKnown RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ITGAXP20702 1163 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 CDH4P55283 916 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PTSQ03393 145 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 DAG1Q14118 895 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 MED22Q15528 200 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PFKFB4Q16877 469 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 TRIM40Q6P9F5 258 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 TBCDQ9BTW9 1192 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 POPDC2Q9HBU9 364 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 KLHL1Q9NR64 748 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 CATSPERZQ9NTU4 200 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 TAS2R7Q9NYW3 318 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PTGFRNQ9P2B2 879 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 TDRKHQ9Y2W6 561 aaKnown RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 SLC30A4O14863 429 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 SUV39H1O43463 412 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 KLHL18O94889 574 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ENO2P09104 434 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 FGFR1P11362 822 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ZNF37AP17032 561 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 CDKN2BP42772 138 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 TTPAP49638 278 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PLK1P53350 603 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 CAMK2GQ13555 558 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PWP1Q13610 501 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 TCEAL1Q15170 157 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 RASAL3Q86YV0 1011 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 CLEC10AQ8IUN9 316 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 CCDC185Q8N715 623 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 SERPINB11Q96P15 392 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ANKRA2Q9H9E1 313 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PAK6Q9NQU5 681 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ADGRE2Q9UHX3 823 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PACSIN3Q9UKS6 424 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 FAM86B1E9PN63 330 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 PSMD10O75832 226 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 FTH1P02794 183 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ANXA5P08758 320 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 FAM86B2P0C5J1 330 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ATF4P18848 351 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 MAPKAPK2P49137 400 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ZNF45Q02386 682 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 FNBP1LQ5T0N5 605 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 DNAJC14Q6Y2X3 702 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 MACC1Q6ZN28 852 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 C11orf74Q86VG3 221 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 LRTOMTQ8WZ04 291 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 DIRAS2Q96HU8 199 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 TAAR1Q96RJ0 339 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 SAE1Q9UBE0 346 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-212ENST00000546744 EGFL7Q9UHF1 273 aa12.81□□□□□ -0.36
PTCH1-212ENST00000546744 ADAMDEC1O15204 470 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 PLOD3O60568 738 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 CHRNGP07510 517 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 HOXC6P09630 235 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 PLCL1Q15111 1095 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 NUDT18Q6ZVK8 323 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 GLB1L3Q8NCI6 653 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 CRELD1Q96HD1 420 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 SCUBE2Q9NQ36 999 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 TRPV5Q9NQA5 729 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 PPM1HQ9ULR3 514 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 ELOVL7A1L3X0 281 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 FBP2O00757 339 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 DENRO43583 198 aaKnown RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 PGRP06401 933 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 YBX3P16989 372 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 GRK4P32298 578 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 TKTL1P51854 596 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 PLEKHG4Q58EX7 1191 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 REP15Q6BDI9 236 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 BHLHB9Q6PI77 547 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 ZNF773Q6PK81 442 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 GCNT7Q6ZNI0 430 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 STRADAQ7RTN6 431 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 R3HCC1LQ7Z5L2 792 aaKnown RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 SPAG16Q8N0X2 631 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 KBTBD7Q8WVZ9 684 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 C12orf43Q96C57 262 aaKnown RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 HSPBAP1Q96EW2 488 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 PWWP2AQ96N64 755 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 NMRK2Q9NPI5 230 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 ZSCAN32Q9NX65 697 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 MYH14Q7Z406 1995 aaKnown RBP12.8□□□□□ -0.36
PTCH1-212ENST00000546744 SGTAO43765 313 aa12.8□□□□□ -0.36
PTCH1-212ENST00000546744 RAMP2O60895 175 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms