RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 MPOP05164 745 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 CTBSQ01459 385 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SEMG2Q02383 582 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 CREB5Q02930 508 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 TRIM16LQ309B1 348 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SLC7A5P1Q8MH63 180 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 TMEM102Q8N9M5 508 aaPredicted RBP14.68□□□□□ -0.06
HOXC11-202ENST00000546378 KATNBL1Q9H079 304 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 KLHL25Q9H0H3 589 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 DNAJB4Q9UDY4 337 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SMIM28A0A1B0GU29 152 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 F8W810 466 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 TREHO43280 583 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SMIM10L2AP0DMW4 78 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SMIM10L2BP0DMW5 78 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SEPHS1P49903 392 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 CLCN2P51788 898 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 PRKCZQ05513 592 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 ARL13BQ3SXY8 428 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 AHI1Q8N157 1196 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 BEGAINQ9BUH8 593 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 MAF1Q9H063 256 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 ASB7Q9H672 318 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 AKTIPQ9H8T0 292 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 TMEM30AQ9NV96 361 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 NDUFA13Q9P0J0 144 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 AFF4Q9UHB7 1163 aaKnown RBP14.68□□□□□ -0.06
HOXC11-202ENST00000546378 PRPF19Q9UMS4 504 aaKnown RBP14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SLC27A5Q9Y2P5 690 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 A8MT66 165 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 KDM1AO60341 852 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 HADHAP40939 763 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 NAPEPLDQ6IQ20 393 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 ZFP1Q6P2D0 407 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SLC26A9Q7LBE3 791 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 SPPL2BQ8TCT7 592 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 TBL1YQ9BQ87 522 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 RHOJQ9H4E5 214 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 ZDHHC7Q9NXF8 308 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 ZNF229Q9UJW7 825 aa14.68□□□□□ -0.06
HOXC11-202ENST00000546378 MYADML2A6NDP7 307 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 FFAR3O14843 346 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 GPR42O15529 346 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 CABYRO75952 493 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 FASP25445 335 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 ABCD1P33897 745 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 MAGEA3P43357 314 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 GRM2Q14416 872 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 AFAP1L2Q8N4X5 818 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 HTRA1Q92743 480 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 GFM2Q969S9 779 aaKnown RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 SLCO4A1Q96BD0 722 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 TBATAQ96M53 351 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 SMURF2Q9HAU4 748 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 AMBNQ9NP70 447 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 PNPLA3Q9NST1 481 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 INVSQ9Y283 1065 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 SCN4AP35499 1836 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 SOAT2O75908 522 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 B3GAT3O94766 335 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 PRDX3P30048 256 aaKnown RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 FMO4P31512 558 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 BRCC3P46736 316 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 DGKQP52824 942 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 DSC2Q02487 901 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 MFSD10Q14728 455 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 GALNT10Q86SR1 603 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 CDYL2Q8N8U2 506 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 SKA2Q8WVK7 121 aaPredicted RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 TMEM40Q8WWA1 233 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 PARP14Q460N5 1801 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 MYO1GB0I1T2 1018 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 DENRO43583 198 aaKnown RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 DIRAS1O95057 198 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 TBX18O95935 607 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 ALBP02768 609 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 TAF6P49848 677 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 AGTR2P50052 363 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 DGKEP52429 567 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 RAB39AQ14964 217 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 FSCN1Q16658 493 aaKnown RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 MORN1Q5T089 497 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 TSTD2Q5T7W7 516 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 BTBD8Q5XKL5 378 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 TIFABQ6ZNK6 161 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 CMTR2Q8IYT2 770 aaKnown RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 DHRSXQ8N5I4 330 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 HPS1Q92902 700 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 KCTD14Q9BQ13 255 aaPredicted RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 THUMPD3Q9BV44 507 aaKnown RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 HERC2P3Q9BVR0 1158 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 RGS18Q9NS28 235 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 MARCH4Q9P2E8 410 aaPredicted RBP14.67□□□□□ -0.06
HOXC11-202ENST00000546378 COQ6Q9Y2Z9 468 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 CORINQ9Y5Q5 1042 aa14.67□□□□□ -0.06
HOXC11-202ENST00000546378 WDR90Q96KV7 1748 aa14.66□□□□□ -0.06
HOXC11-202ENST00000546378 TRPC5OSA6NMA1 111 aa14.66□□□□□ -0.06
HOXC11-202ENST00000546378 UPK3BL1B0FP48 263 aa14.66□□□□□ -0.06
HOXC11-202ENST00000546378 UPK3BL2E5RIL1 263 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms