RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ZNF830Q96NB3 372 aaPredicted RBP9.37□□□□□ -0.91
YBX3-218ENST00000546298 TMEM74Q96NL1 305 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 TSGA13Q96PP4 275 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 GFM1Q96RP9 751 aaKnown RBP9.37□□□□□ -0.91
YBX3-218ENST00000546298 MCCC1Q96RQ3 725 aaPredicted RBP9.37□□□□□ -0.91
YBX3-218ENST00000546298 DNAJC7Q99615 494 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 GSDMCQ9BYG8 508 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 STRADBQ9C0K7 418 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 CYP4F12Q9HCS2 524 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 FGF22Q9HCT0 170 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 RBM22Q9NW64 420 aaKnown RBP eCLIP9.37□□□□□ -0.91
YBX3-218ENST00000546298 SIRPGQ9P1W8 387 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 NENFQ9UMX5 172 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 PPIL1Q9Y3C6 166 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 PCDHGA8Q9Y5G5 932 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 ENTPD2Q9Y5L3 495 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 RAI2Q9Y5P3 530 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 PKD1L2Q7Z442 2459 aa9.37□□□□□ -0.91
YBX3-218ENST00000546298 TMEM131Q92545 1883 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 CCDC187A0A096LP49 1063 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 PRSS38A1L453 326 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 NTN3O00634 580 aaPredicted RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 MFSD11O43934 449 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 RPLP0P05388 317 aaKnown RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 TMEM253P0C7T8 217 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 PNLIPP16233 465 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 GLB1P16278 677 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 ZNF30P17039 623 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 GM2AP17900 193 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 ETV3P41162 512 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 ARHGAP25P42331 645 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 RPL26P61254 145 aaKnown RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 DPTQ07507 201 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 EIF3IQ13347 325 aaKnown RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 TCEA2Q15560 299 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 ATP13A4Q4VNC1 1196 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 SOWAHCQ53LP3 525 aaPredicted RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 C3orf38Q5JPI3 329 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 NCBP2-AS2Q69YL0 99 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 RAET1GQ6H3X3 334 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 Q6ZVL8 140 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 GPR155Q7Z3F1 870 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 HSD11B1LQ7Z5J1 315 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 NLRP8Q86W28 1048 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 HEATR4Q86WZ0 1026 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 RAVER1Q8IY67 606 aaKnown RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 CBARPQ8N350 705 aaPredicted RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 GPR156Q8NFN8 814 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 PIH1D2Q8WWB5 315 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 KCNE4Q8WWG9 221 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 MAML1Q92585 1016 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 FAF2Q96CS3 445 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 HIC2Q96JB3 615 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 CCDC42Q96M95 316 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 SLC46A1Q96NT5 459 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 UBL7Q96S82 380 aaPredicted RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 TEX101Q9BY14 249 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 DPEP2Q9H4A9 486 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 CARS2Q9HA77 564 aaKnown RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 TRNAU1APQ9NX07 287 aaKnown RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 RPL26L1Q9UNX3 145 aaKnown RBP9.36□□□□□ -0.91
YBX3-218ENST00000546298 SATB2Q9UPW6 733 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 PLXNB3Q9ULL4 1909 aa9.36□□□□□ -0.91
YBX3-218ENST00000546298 ASXL3Q9C0F0 2248 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TEX51A0A1B0GUA7 166 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 GOLGA6CA6NDK9 693 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 GOLGA6BA6NDN3 693 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 NPIPB15A6NHN6 443 aaPredicted RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 ZNF487B1APH4 448 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 NUDT21O43809 227 aaKnown RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 CD48P09326 243 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 GOLGA6DP0CG33 693 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 CCNB1P14635 433 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 CTPS1P17812 591 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 LHCGRP22888 699 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 KDELR1P24390 212 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 GPR1P46091 355 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 CCL7P80098 99 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 CDK3Q00526 305 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TLE3Q04726 772 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 BIRC2Q13490 618 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 ASTE1Q2TB18 679 aaPredicted RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 C14orf28Q4W4Y0 310 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 ODF2Q5BJF6 829 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 CERCAMQ5T4B2 595 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 ALG1LQ6GMV1 187 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 ZNF765Q7L2R6 523 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TECPR1Q7Z6L1 1165 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 VSIG1Q86XK7 387 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 CCNJLQ8IV13 435 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 VSTM4Q8IW00 320 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 RHOT2Q8IXI1 618 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 CCDC13Q8IYE1 715 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 NRSN1Q8IZ57 195 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 LSM14AQ8ND56 463 aaKnown RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 CCNYQ8ND76 341 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.35□□□□□ -0.91
YBX3-218ENST00000546298 GPBAR1Q8TDU6 330 aa9.35□□□□□ -0.91
YBX3-218ENST00000546298 TMEM159Q96B96 161 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms