RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 C1orf216Q8TAB5 229 aa16.3■□□□□ 0.2
LIMS2-217ENST00000545738 ZC3H10Q96K80 434 aaKnown RBP16.3■□□□□ 0.2
LIMS2-217ENST00000545738 ZNF778Q96MU6 729 aa16.3■□□□□ 0.2
LIMS2-217ENST00000545738 SERPINB12Q96P63 405 aa16.3■□□□□ 0.2
LIMS2-217ENST00000545738 MYOCQ99972 504 aa16.3■□□□□ 0.2
LIMS2-217ENST00000545738 WDR83Q9BRX9 315 aaKnown RBP16.3■□□□□ 0.2
LIMS2-217ENST00000545738 C1QTNF2Q9BXJ5 285 aa16.3■□□□□ 0.2
LIMS2-217ENST00000545738 TMEM74BQ9NUR3 256 aa16.3■□□□□ 0.2
LIMS2-217ENST00000545738 ZNF106Q9H2Y7 1883 aaKnown RBP16.29■□□□□ 0.2
LIMS2-217ENST00000545738 ATXN2Q99700 1313 aaKnown RBP16.29■□□□□ 0.2
LIMS2-217ENST00000545738 GOLGA6CA6NDK9 693 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 GOLGA6BA6NDN3 693 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 MAP3K13O43283 966 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 LDB2O43679 373 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 GOLGA6DP0CG33 693 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 ITPKAP23677 461 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 MAGEA3P43357 314 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 SFSWAPQ12872 951 aaKnown RBP16.29■□□□□ 0.2
LIMS2-217ENST00000545738 SIM2Q14190 667 aaPredicted RBP16.29■□□□□ 0.2
LIMS2-217ENST00000545738 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 KIAA1161Q6NSJ0 714 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 SLC36A4Q6YBV0 504 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 TMC3Q7Z5M5 1100 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 TECPR1Q7Z6L1 1165 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 PPIL6Q8IXY8 311 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 CADM4Q8NFZ8 388 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 CXorf40AQ8TE69 158 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 SEC14L1Q92503 715 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 SNF8Q96H20 258 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 MBNL1Q9NR56 388 aaKnown RBP16.29■□□□□ 0.2
LIMS2-217ENST00000545738 GOLGA6AQ9NYA3 693 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 EIF2B4Q9UI10 523 aaKnown RBP16.29■□□□□ 0.2
LIMS2-217ENST00000545738 CD84Q9UIB8 345 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 OTOGLQ3ZCN5 2332 aa16.29■□□□□ 0.2
LIMS2-217ENST00000545738 CCDC78A2IDD5 438 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 H0Y8X5 98 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 K7ESM1 405 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CCL22O00626 93 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 SLC31A1O15431 190 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 PSMD3O43242 534 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 RECQL5O94762 991 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CYP2A6P11509 494 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CNR2P34972 360 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 SESN2P58004 480 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-217ENST00000545738 RPS21P63220 83 aaKnown RBP16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CREB5Q02930 508 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CCDC15Q0P6D6 951 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CDH17Q12864 832 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 FNBP1LQ5T0N5 605 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 NEK5Q6P3R8 708 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 LRRC8BQ6P9F7 803 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 LAYNQ6UX15 382 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 ZDHHC24Q6UX98 284 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 PRR23BQ6ZRT6 265 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 TP53I13Q8NBR0 393 aaPredicted RBP16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CCHCR1Q8TD31 782 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 SNX19Q92543 992 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 SCAMP4Q969E2 229 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 LRRC45Q96CN5 670 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 SLC17A9Q9BYT1 436 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 EPC1Q9H2F5 836 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 ZFYVE1Q9HBF4 777 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 BPIFA1Q9NP55 256 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 PI4KAP42356 2102 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 GPR39O43194 453 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 MGAT1P26572 445 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CA5AP35218 305 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CCR5P51681 352 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 WSCD2Q2TBF2 565 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 PPP1R21Q6ZMI0 780 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CEP68Q76N32 757 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 LPCAT2Q7L5N7 544 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 GLT6D1Q7Z4J2 308 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 LINC00523Q86TU6 105 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 DNAAF3Q8N9W5 541 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 PLA2G15Q8NCC3 412 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 MCUQ8NE86 351 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 OR13C4Q8NGS5 318 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CENPTQ96BT3 561 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 PHOX2BQ99453 314 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 AGAP2Q99490 1192 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 CAAP1Q9H8G2 361 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 SYBUQ9NX95 663 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 IL17CQ9P0M4 197 aa16.28■□□□□ 0.2
LIMS2-217ENST00000545738 A0A1W2PPC4 97 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 GAPDHSO14556 408 aaPredicted RBP16.27■□□□□ 0.19
LIMS2-217ENST00000545738 TM7SF2O76062 418 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 SOD1P00441 154 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 ZNF30P17039 623 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 BPIP17213 487 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 HMGCLP35914 325 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 DHPSP49366 369 aaPredicted RBP16.27■□□□□ 0.19
LIMS2-217ENST00000545738 ZNF140P52738 457 aaPredicted RBP16.27■□□□□ 0.19
LIMS2-217ENST00000545738 CLDN2P57739 230 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 CDK16Q00536 496 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 GUCY2DQ02846 1103 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 ARHGEF7Q14155 803 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 ACOX1Q15067 660 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 CCDC70Q6NSX1 233 aa16.27■□□□□ 0.19
LIMS2-217ENST00000545738 SUMF1Q8NBK3 374 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms