RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CTNNBL1Q8WYA6 563 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-210ENST00000545493 ZNF578Q96N58 590 aaPredicted RBP21.14■□□□□ 0.97
SCARB1-210ENST00000545493 SMIM14Q96QK8 99 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 PRORYQ9H606 182 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 SYNDIG1Q9H7V2 258 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 RAI2Q9Y5P3 530 aa21.14■□□□□ 0.97
SCARB1-210ENST00000545493 KIF26BQ2KJY2 2108 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 A0A0U1RQS6 177 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 TNFRSF10CO14798 259 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 TPM3P06753 285 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 PDHA1P08559 390 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 H2AFZP0C0S5 128 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 CYP2A6P11509 494 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-210ENST00000545493 MYCLP1P12525 358 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-210ENST00000545493 CTPS1P17812 591 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 KELP23276 732 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 MAN1A1P33908 653 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 PCBP4P57723 403 aaKnown RBP21.13■□□□□ 0.97
SCARB1-210ENST00000545493 TLE3Q04726 772 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 ARMC12Q5T9G4 340 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 SPECC1LQ69YQ0 1117 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 IGF2-ASQ6U949 168 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 H2AFVQ71UI9 128 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 HEATR4Q86WZ0 1026 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 LRRC49Q8IUZ0 686 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 SPACA3Q8IXA5 215 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 PQLC3Q8N755 202 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 GPR156Q8NFN8 814 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 CCL4L1Q8NHW4 92 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 WDR48Q8TAF3 677 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 LRRN4Q8WUT4 740 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 SCG3Q8WXD2 468 aaKnown RBP21.13■□□□□ 0.97
SCARB1-210ENST00000545493 PRR11Q96HE9 360 aaPredicted RBP21.13■□□□□ 0.97
SCARB1-210ENST00000545493 SEMA3CQ99985 751 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 POLR1EQ9GZS1 481 aaKnown RBP21.13■□□□□ 0.97
SCARB1-210ENST00000545493 TMEM168Q9H0V1 697 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 ATRXP46100 2492 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 MGAQ8IWI9 3026 aa21.13■□□□□ 0.97
SCARB1-210ENST00000545493 PRSS38A1L453 326 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 PSMD11O00231 422 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 TMEM253P0C7T8 217 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 DSC2Q02487 901 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 GBE1Q04446 702 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 TRIM14Q14142 442 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 SPIDRQ14159 915 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 USP45Q70EL2 814 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 LSMEM2Q8N112 164 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 PTCD2Q8WV60 388 aaKnown RBP21.12■□□□□ 0.97
SCARB1-210ENST00000545493 SCRN2Q96FV2 425 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 TEX101Q9BY14 249 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 CYP4F12Q9HCS2 524 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 ABHD10Q9NUJ1 306 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 PPIL1Q9Y3C6 166 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 ATMQ13315 3056 aa21.12■□□□□ 0.97
SCARB1-210ENST00000545493 A0A1W2PQM1 296 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 SSU72P8A0A1W2PR75 194 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 D6RAR5 112 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 NOBOXO60393 691 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 SOD1P00441 154 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 HLA-DQB2P05538 268 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 ERVPABLB-1P60509 514 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 CDK3Q00526 305 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 PDK2Q15119 407 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 LRRC66Q68CR7 880 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 TIGD7Q6NT04 549 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-210ENST00000545493 RFLNAQ6ZTI6 216 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 B3GNT8Q7Z7M8 397 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 VSTM4Q8IW00 320 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 KCTD6Q8NC69 237 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 ZNF248Q8NDW4 579 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 FATE1Q969F0 183 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 GRAMD1AQ96CP6 724 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 LGMNQ99538 433 aa21.11■□□□□ 0.97
SCARB1-210ENST00000545493 TDRD1Q9BXT4 1180 aaKnown RBP21.11■□□□□ 0.97
SCARB1-210ENST00000545493 FRMD8Q9BZ67 464 aaPredicted RBP21.11■□□□□ 0.97
SCARB1-210ENST00000545493 B4DGG1 531 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 MATN3O15232 486 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 CBFA2T2O43439 604 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 MFAP3LO75121 409 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 RPLP0P05388 317 aaKnown RBP21.1■□□□□ 0.97
SCARB1-210ENST00000545493 NFKBIAP25963 317 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 ITKQ08881 620 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 ARHGEF7Q14155 803 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 IFI16Q16666 785 aaKnown RBP21.1■□□□□ 0.97
SCARB1-210ENST00000545493 CERCAMQ5T4B2 595 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 RAET1GQ6H3X3 334 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 OGFOD3Q6PK18 319 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 Q6ZVL8 140 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 TECPR1Q7Z6L1 1165 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 TAF8Q7Z7C8 310 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 OR8K1Q8NGG5 319 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 ARRDC2Q8TBH0 407 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 RAPGEF5Q92565 580 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 NAF1Q96HR8 494 aaKnown RBP21.1■□□□□ 0.97
SCARB1-210ENST00000545493 FCRL3Q96P31 734 aaPredicted RBP21.1■□□□□ 0.97
SCARB1-210ENST00000545493 TSGA13Q96PP4 275 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 DEF6Q9H4E7 631 aa21.1■□□□□ 0.97
SCARB1-210ENST00000545493 CARS2Q9HA77 564 aaKnown RBP21.1■□□□□ 0.97
SCARB1-210ENST00000545493 PHPT1Q9NRX4 125 aaPredicted RBP21.1■□□□□ 0.97
SCARB1-210ENST00000545493 CD84Q9UIB8 345 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms