RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 WDR26Q9H7D7 661 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 KLQ9UEF7 1012 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 KLK13Q9UKR3 277 aa15.74■□□□□ 0.11
CCDC78-216ENST00000544996 CAPN8A6NHC0 703 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 HACD1B0YJ81 288 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 RFPL3O75679 317 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 RASGRP1O95267 797 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 PRLP01236 227 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 PTMAP06454 111 aaKnown RBP15.73■□□□□ 0.11
CCDC78-216ENST00000544996 HOXC4P09017 264 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-216ENST00000544996 CTSEP14091 401 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 TSHRP16473 764 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 TRIM23P36406 574 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 ETV3P41162 512 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 ILKQ13418 452 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 IHHQ14623 411 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 PROX2Q3B8N5 592 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 CCDC70Q6NSX1 233 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 CRTC1Q6UUV9 634 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 Q6ZVL8 140 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 TSPAN33Q86UF1 283 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 RBFAQ8N0V3 343 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 CBARPQ8N350 705 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-216ENST00000544996 GALNT15Q8N3T1 639 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 RNF10Q8N5U6 811 aaKnown RBP15.73■□□□□ 0.11
CCDC78-216ENST00000544996 HAUS1Q96CS2 278 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 TEKT5Q96M29 485 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 CNTNAP3BQ96NU0 1288 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 RBM15Q96T37 977 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC78-216ENST00000544996 VAT1Q99536 393 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 MLPHQ9BV36 600 aaPredicted RBP15.73■□□□□ 0.11
CCDC78-216ENST00000544996 CNTNAP3Q9BZ76 1288 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 OSBPL8Q9BZF1 889 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 TSGA10Q9BZW7 698 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 NCKIPSDQ9NZQ3 722 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 MSRB2Q9Y3D2 182 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 CABIN1Q9Y6J0 2220 aa15.73■□□□□ 0.11
CCDC78-216ENST00000544996 GOLGA6CA6NDK9 693 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 GOLGA6BA6NDN3 693 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 MIF4GDA9UHW6 222 aaKnown RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 ANKRD66B4E2M5 251 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 APOC4-APOC2K7ER74 178 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 K7ESM1 405 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 TPP1O14773 563 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 ARHGAP6O43182 974 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 TJP3O95049 919 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 APOC2P02655 101 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 MMP2P08253 660 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 GOLGA6DP0CG33 693 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 GM2AP17900 193 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 PTPN3P26045 913 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 PTPN7P35236 360 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 TNNT3P45378 269 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 ACADVLP49748 655 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 DUSP3P51452 185 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 HK3P52790 923 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 KIAA1024LP59773 190 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 SRP54P61011 504 aaKnown RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 XRCC4Q13426 336 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 PTPRRQ15256 657 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 ELOCQ15369 112 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 SLC14A2Q15849 920 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 ALG11Q2TAA5 492 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 ZCCHC8Q6NZY4 707 aaKnown RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 RD3Q7Z3Z2 195 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 FSTL5Q8N475 847 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 HTR3CQ8WXA8 447 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 SCG3Q8WXD2 468 aaKnown RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 TSACCQ96A04 125 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 FUBP1Q96AE4 644 aaKnown RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 APOLD1Q96LR9 279 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 TCEAL2Q9H3H9 227 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 CAAP1Q9H8G2 361 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 USP29Q9HBJ7 922 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 GLOD4Q9HC38 313 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 PHPT1Q9NRX4 125 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 GOLGA6AQ9NYA3 693 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 KLHL8Q9P2G9 620 aaPredicted RBP15.72■□□□□ 0.11
CCDC78-216ENST00000544996 TRIM10Q9UDY6 481 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 DOLKQ9UPQ8 538 aa15.72■□□□□ 0.11
CCDC78-216ENST00000544996 SHROOM3Q8TF72 1996 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 COL5A1P20908 1838 aaPredicted RBP15.71■□□□□ 0.11
CCDC78-216ENST00000544996 FAM221BA6H8Z2 402 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 LMO7DNF2Z398 122 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 H7C0C1 242 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 TNFRSF10CO14798 259 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 KRT86O43790 486 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 NRDCO43847 1150 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 TNFP01375 233 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 PYGLP06737 847 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 ANXA6P08133 673 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 GIMD1P0DJR0 217 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 MYCLP1P12525 358 aaPredicted RBP15.71■□□□□ 0.11
CCDC78-216ENST00000544996 CKMT1AP12532 417 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 ACP1P24666 158 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 ATP5OP48047 213 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 PTSQ03393 145 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 DPTQ07507 201 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 PCSK7Q16549 785 aa15.71■□□□□ 0.11
CCDC78-216ENST00000544996 DHRS13Q6UX07 377 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms