RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 PDXPQ96GD0 296 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 TBATAQ96M53 351 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 COQ10AQ96MF6 247 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 SMIM14Q96QK8 99 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 LGR4Q9BXB1 951 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 CEP41Q9BYV8 373 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 RBSNQ9H1K0 784 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 LUC7LQ9NQ29 371 aaKnown RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 PHPT1Q9NRX4 125 aaPredicted RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 DDX56Q9NY93 547 aaKnown RBP13.17□□□□□ -0.3
CIT-214ENST00000544588 CD84Q9UIB8 345 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 PADI4Q9UM07 663 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 PCDHA13Q9Y5I0 950 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 U3KQA8 63 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 DOCK4Q8N1I0 1966 aa13.17□□□□□ -0.3
CIT-214ENST00000544588 EME2A4GXA9 379 aaPredicted RBP13.16□□□□□ -0.3
CIT-214ENST00000544588 CAPNS1P04632 268 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 GP1BAP07359 652 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 GM2AP17900 193 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 LHCGRP22888 699 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 CD86P42081 329 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 GPR1P46091 355 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 ZNF75DP51815 510 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 KIAA1024LP59773 190 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 NIPAL4Q0D2K0 466 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 PDK1Q15118 436 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 LRRC66Q68CR7 880 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 KCTD16Q68DU8 428 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 DOK6Q6PKX4 331 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 KDELC2Q7Z4H8 507 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 HEATR4Q86WZ0 1026 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 PELI3Q8N2H9 469 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 PLD5Q8N7P1 536 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 DCBLD1Q8N8Z6 715 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 FAM46DQ8NEK8 389 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 DTD2Q96FN9 168 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 DEPDC7Q96QD5 511 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 BOCQ9BWV1 1114 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 DPEP2Q9H4A9 486 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 CARS2Q9HA77 564 aaKnown RBP13.16□□□□□ -0.3
CIT-214ENST00000544588 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 KCTD5Q9NXV2 234 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
CIT-214ENST00000544588 TFR2Q9UP52 801 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
CIT-214ENST00000544588 IGF2RP11717 2491 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 C3orf70A6NLC5 250 aaPredicted RBP13.15□□□□□ -0.3
CIT-214ENST00000544588 PSMD11O00231 422 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 PPP1R12AO14974 1030 aaPredicted RBP13.15□□□□□ -0.3
CIT-214ENST00000544588 USP12O75317 370 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 CSO75390 466 aaKnown RBP13.15□□□□□ -0.3
CIT-214ENST00000544588 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
CIT-214ENST00000544588 TGM2P21980 687 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 TRIM23P36406 574 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 PERM1Q5SV97 790 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 SLC9A4Q6AI14 798 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 MFSD7Q6UXD7 560 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 RFLNAQ6ZTI6 216 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 CCDC170Q8IYT3 715 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 ARL10Q8N8L6 244 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 ARRDC2Q8TBH0 407 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 NAT6Q93015 286 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 AP2M1Q96CW1 435 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 AGAP3Q96P47 875 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 MCCC1Q96RQ3 725 aaPredicted RBP13.15□□□□□ -0.3
CIT-214ENST00000544588 CCDC3Q9BQI4 270 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.3
CIT-214ENST00000544588 NRSN2Q9GZP1 204 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 TMEM168Q9H0V1 697 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 GOLPH3Q9H4A6 298 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 DGKBQ9Y6T7 804 aa13.15□□□□□ -0.3
CIT-214ENST00000544588 TRPM6Q9BX84 2022 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 A0A0J9YYE9 177 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 PRSS38A1L453 326 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 TNFRSF10CO14798 259 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 FZD6O60353 706 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 CLDN7O95471 211 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 TRBC1P01850 177 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 HOXC4P09017 264 aaPredicted RBP13.14□□□□□ -0.31
CIT-214ENST00000544588 MYCLP1P12525 358 aaPredicted RBP13.14□□□□□ -0.31
CIT-214ENST00000544588 GNPDA1P46926 289 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 POLD2P49005 469 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 CDK3Q00526 305 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 PTSQ03393 145 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 PPIDQ08752 370 aaKnown RBP13.14□□□□□ -0.31
CIT-214ENST00000544588 ZBTB17Q13105 803 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 BIRC2Q13490 618 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 TFDP2Q14188 446 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 BZW1Q7L1Q6 419 aaKnown RBP13.14□□□□□ -0.31
CIT-214ENST00000544588 CACTIN-AS1Q8N1I8 211 aa13.14□□□□□ -0.31
CIT-214ENST00000544588 SDR16C5Q8N3Y7 309 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms