RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 SMAD1Q15797 465 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 CCDC157Q569K6 752 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NCBP2-AS2Q69YL0 99 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ITPRIPL1Q6GPH6 555 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ENPP7Q6UWV6 458 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 LIPIQ6XZB0 460 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 GCNT7Q6ZNI0 430 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 CYP4V2Q6ZWL3 525 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ZNF765Q7L2R6 523 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TMPRSS7Q7RTY8 843 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NLRP8Q86W28 1048 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 GATAD2AQ86YP4 633 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 HID1Q8IV36 788 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 KATNAL2Q8IYT4 538 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PHACTR4Q8IZ21 702 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ZNF843Q8N446 348 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 RNF10Q8N5U6 811 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TEX26Q8N6G2 289 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NPWQ8N729 165 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TC2NQ8N9U0 490 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TTC13Q8NBP0 860 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 LSM14AQ8ND56 463 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 OR13H1Q8NG92 308 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 OR56A4Q8NGH8 313 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 EXD1Q8NHP7 514 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 BAHD1Q8TBE0 780 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 LMX1AQ8TE12 382 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC39A7Q92504 469 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TSC1Q92574 1164 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ECHDC3Q96DC8 303 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NXPE2Q96DL1 559 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 CCDC97Q96F63 343 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ALS2CR12Q96Q35 445 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 CHP1Q99653 195 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 SEMA3CQ99985 751 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 APOOQ9BUR5 198 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 MLPHQ9BV36 600 aaPredicted RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 GSDMCQ9BYG8 508 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 STRADBQ9C0K7 418 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 KLC2Q9H0B6 622 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 TRABDQ9H4I3 376 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 CCDC86Q9H6F5 360 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 EBF2Q9HAK2 575 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 NOD2Q9HC29 1040 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PCDH9Q9HC56 1237 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 FZD3Q9NPG1 666 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 SEPT10Q9P0V9 454 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 MOSPD1Q9UJG1 213 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 AMFRQ9UKV5 643 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 PCDHGC4Q9Y5F7 938 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 ALG6Q9Y672 507 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 DGKBQ9Y6T7 804 aa5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 GOLGA4Q13439 2230 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-215ENST00000544584 POM121BA6NF01 834 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 C10orf142B7Z368 130 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 F8W8V4 182 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 KCNK3O14649 394 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ATXN7O15265 892 aaPredicted RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 FFAR2O15552 330 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 MFSD11O43934 449 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CST8O60676 142 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ANXA9O76027 345 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 HEXIM1O94992 359 aaKnown RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 GAS8O95995 478 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PCCBP05166 539 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ATXN1LP0C7T5 689 aaKnown RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 MYCLP1P12525 358 aaPredicted RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 VCLP18206 1134 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 TRIM23P36406 574 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ABL2P42684 1182 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 GPR1P46091 355 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PFN3P60673 137 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 IFI35P80217 286 aaPredicted RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 DPTQ07507 201 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 BNIP3Q12983 259 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 MMRN1Q13201 1228 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 XRCC4Q13426 336 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 LAMB3Q13751 1172 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 LRP8Q14114 963 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 FZD2Q14332 565 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 IRF4Q15306 451 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PPP2R5EQ16537 467 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 TEX44Q53QW1 395 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PRAMEF14Q5SWL7 426 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 KAZNQ674X7 775 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 DENND2CQ68D51 928 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PDPK2PQ6A1A2 396 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 SLC9A4Q6AI14 798 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 ALG1LQ6GMV1 187 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 RAET1GQ6H3X3 334 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PNCKQ6P2M8 343 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 LAYNQ6UX15 382 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CCNI2Q6ZMN8 369 aaPredicted RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 LRRC69Q6ZNQ3 347 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 RD3Q7Z3Z2 195 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 PEX26Q7Z412 305 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 TAF8Q7Z7C8 310 aa5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CDKL3Q8IVW4 592 aaPredicted RBP5.61□□□□□ -1.51
CLSTN3-215ENST00000544584 CHCHD4Q8N4Q1 142 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms