RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TGM2P21980 687 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 LHCGRP22888 699 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 TEAD1P28347 426 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 CDC25BP30305 580 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 RPIAP49247 311 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 SRP54P61011 504 aaKnown RBP23.28■■□□□ 1.32
CHFR-222ENST00000544093 ALG11Q2TAA5 492 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 DAAM2Q86T65 1068 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 HID1Q8IV36 788 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 CBARPQ8N350 705 aaPredicted RBP23.28■■□□□ 1.32
CHFR-222ENST00000544093 PLA2G15Q8NCC3 412 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 ZCCHC14Q8WYQ9 949 aaKnown RBP23.28■■□□□ 1.32
CHFR-222ENST00000544093 PCDH9Q9HC56 1237 aa23.28■■□□□ 1.32
CHFR-222ENST00000544093 TNFP01375 233 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 DYNLT1P63172 113 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 DPTQ07507 201 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 SPOCD1Q6ZMY3 1216 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 GKN2Q86XP6 184 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 PDCD7Q8N8D1 485 aaKnown RBP23.27■■□□□ 1.32
CHFR-222ENST00000544093 OR56A4Q8NGH8 313 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 EXD1Q8NHP7 514 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 FUBP1Q96AE4 644 aaKnown RBP23.27■■□□□ 1.32
CHFR-222ENST00000544093 BAG1Q99933 345 aaPredicted RBP23.27■■□□□ 1.32
CHFR-222ENST00000544093 BOCQ9BWV1 1114 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 ADGRE3Q9BY15 652 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 PHPT1Q9NRX4 125 aaPredicted RBP23.27■■□□□ 1.32
CHFR-222ENST00000544093 DOLKQ9UPQ8 538 aa23.27■■□□□ 1.32
CHFR-222ENST00000544093 CAPN8A6NHC0 703 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 GOLGA6L6A8MZA4 724 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 MTSS1O43312 755 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 CST8O60676 142 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 GCATO75600 419 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 PYGLP06737 847 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 MYCLP1P12525 358 aaPredicted RBP23.26■■□□□ 1.31
CHFR-222ENST00000544093 NIPAL4Q0D2K0 466 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 SLC14A2Q15849 920 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 DEFB133Q30KQ1 61 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 C6orf132Q5T0Z8 1188 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 HES3Q5TGS1 186 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 DENND2CQ68D51 928 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 HSD11B1LQ7Z5J1 315 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.26■■□□□ 1.31
CHFR-222ENST00000544093 LYSMD1Q96S90 227 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 TCEAL2Q9H3H9 227 aaPredicted RBP23.26■■□□□ 1.31
CHFR-222ENST00000544093 PNMA8BQ9ULN7 279 aaPredicted RBP23.26■■□□□ 1.31
CHFR-222ENST00000544093 CHKBQ9Y259 395 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 FREM2Q5SZK8 3169 aa23.26■■□□□ 1.31
CHFR-222ENST00000544093 CTPS1P17812 591 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 ETV3P41162 512 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 NAP1L1P55209 391 aaKnown RBP23.25■■□□□ 1.31
CHFR-222ENST00000544093 COPS2P61201 443 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 ZBTB17Q13105 803 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 NR0B2Q15466 257 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 PPP2R5EQ16537 467 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 LRRC66Q68CR7 880 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 ZNF765Q7L2R6 523 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 NLRP8Q86W28 1048 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 CCDC50Q8IVM0 306 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 LRRN4Q8WUT4 740 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 TFB1MQ8WVM0 346 aaKnown RBP23.25■■□□□ 1.31
CHFR-222ENST00000544093 P3H4Q92791 437 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 TSACCQ96A04 125 aaPredicted RBP23.25■■□□□ 1.31
CHFR-222ENST00000544093 TEX101Q9BY14 249 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 CCDC86Q9H6F5 360 aaKnown RBP23.25■■□□□ 1.31
CHFR-222ENST00000544093 DKK4Q9UBT3 224 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 ZMIZ1Q9ULJ6 1067 aa23.25■■□□□ 1.31
CHFR-222ENST00000544093 WDFY3Q8IZQ1 3526 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 YY2O15391 372 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 PRLP01236 227 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 CD86P42081 329 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 VAV2P52735 878 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 C1orf61Q13536 156 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 CRTC1Q6UUV9 634 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 NPNTQ6UXI9 565 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 Q6ZVL8 140 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 RD3Q7Z3Z2 195 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 TECPR1Q7Z6L1 1165 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 TSPAN33Q86UF1 283 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 NT5DC3Q86UY8 548 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 NRSN1Q8IZ57 195 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 CNTD1Q8N815 330 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 LPCAT1Q8NF37 534 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 NAT6Q93015 286 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 IMP4Q96G21 291 aaKnown RBP23.24■■□□□ 1.31
CHFR-222ENST00000544093 RBM15Q96T37 977 aaKnown RBP eCLIP23.24■■□□□ 1.31
CHFR-222ENST00000544093 CLPBQ9H078 707 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 SLC25A51Q9H1U9 297 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 GOLPH3Q9H4A6 298 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 CAAP1Q9H8G2 361 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 TFR2Q9UP52 801 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 CLCA2Q9UQC9 943 aa23.24■■□□□ 1.31
CHFR-222ENST00000544093 hCG_1818297A0A087WSY0 165 aa23.23■■□□□ 1.31
CHFR-222ENST00000544093 LY6G6EA0A0G2JKS1 128 aa23.23■■□□□ 1.31
CHFR-222ENST00000544093 CCDC66A2RUB6 948 aa23.23■■□□□ 1.31
CHFR-222ENST00000544093 EME2A4GXA9 379 aaPredicted RBP23.23■■□□□ 1.31
CHFR-222ENST00000544093 FAM149AA5PLN7 773 aa23.23■■□□□ 1.31
CHFR-222ENST00000544093 TMEM202A6NGA9 273 aa23.23■■□□□ 1.31
CHFR-222ENST00000544093 PJA2O43164 708 aa23.23■■□□□ 1.31
CHFR-222ENST00000544093 MMP2P08253 660 aa23.23■■□□□ 1.31
CHFR-222ENST00000544093 CTNNA1P35221 906 aaKnown RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms