RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 PSMD12O00232 456 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ACOT8O14734 319 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 MUSKO15146 869 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CD3EAPO15446 510 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 AP1G1O43747 822 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TLR5O60602 858 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 RNASEH1O60930 286 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 VNN2O95498 520 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 NDST3O95803 873 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 GOT2P00505 430 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 SERPINF2P08697 491 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ELNP15502 786 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF37AP17032 561 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 HOXD9P28356 352 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ALDH1A3P47895 512 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 STC1P52823 247 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 NUBP1P53384 320 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 C1QTNF8P60827 252 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CAMK2BQ13554 666 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ADGRE1Q14246 886 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 FASTKQ14296 549 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 GRM2Q14416 872 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 MGAT5BQ3V5L5 792 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 RARS2Q5T160 578 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF549Q6P9A3 640 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 GET4Q7L5D6 327 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CIR1Q86X95 450 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ABI1Q8IZP0 508 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ICA1LQ8NDH6 482 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 HIPK4Q8NE63 616 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ASB9Q96DX5 294 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 HHIPL1Q96JK4 782 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 DNAJC1Q96KC8 554 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 MARK4Q96L34 752 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TBATAQ96M53 351 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TMEM175Q9BSA9 504 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 AARSD1Q9BTE6 412 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 SLC25A23Q9BV35 468 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 GPR62Q9BZJ7 368 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 UNC93B1Q9H1C4 597 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CRISPLD1Q9H336 500 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TFB2MQ9H5Q4 396 aaKnown RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ALG9Q9H6U8 611 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TNFRSF12AQ9NP84 129 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 POLR3BQ9NW08 1133 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CACNA2D2Q9NY47 1150 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 SEPT3Q9UH03 358 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 RIMS3Q9UJD0 308 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 DTNAQ9Y4J8 743 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TRAF6Q9Y4K3 522 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CCDC162PA2VCL2 907 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 FGF4P08620 206 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 UBTFL6P0CB48 400 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ETFBP38117 255 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ZNF140P52738 457 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 PLK1P53350 603 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CDH4P55283 916 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 NAA20P61599 178 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TIAL1Q01085 375 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 LRP8Q14114 963 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 UNC50Q53HI1 259 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 REP15Q6BDI9 236 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 FUT10Q6P4F1 479 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 GK5Q6ZS86 529 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 LARP4Q71RC2 724 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 LRRC8DQ7L1W4 858 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 PIM3Q86V86 326 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TICAM1Q8IUC6 712 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ADCY4Q8NFM4 1077 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 OR4L1Q8NH43 312 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 RIN3Q8TB24 985 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 BLOC1S5Q8TDH9 187 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 GPR152Q8TDT2 470 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 OVCA2Q8WZ82 227 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 PTERQ96BW5 349 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 PHF21BQ96EK2 531 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 MYEOVQ96EZ4 313 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CASD1Q96PB1 797 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 PSKH2Q96QS6 385 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TUBGCP5Q96RT8 1024 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 ZIC5Q96T25 663 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 SEPT5Q99719 369 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 NPAS2Q99743 824 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 SUDS3Q9H7L9 328 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CCSER2Q9H7U1 834 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 CATSPERZQ9NTU4 200 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 NLE1Q9NVX2 485 aaPredicted RBP6.55□□□□□ -1.36
PTPRO-208ENST00000542557 KCTD3Q9Y597 815 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 PCDHGA7Q9Y5G6 932 aa6.55□□□□□ -1.36
PTPRO-208ENST00000542557 TTC24A2A3L6 582 aaPredicted RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 OR51F1A6NGY5 319 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SLC38A8A6NNN8 435 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 BBIP1A8MTZ0 92 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CCL22O00626 93 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 UBFD1O14562 309 aaKnown RBP6.54□□□□□ -1.36
PTPRO-208ENST00000542557 TRIM24O15164 1050 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 ACSL4O60488 711 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 SOAT2O75908 522 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 CRTAMO95727 393 aa6.54□□□□□ -1.36
PTPRO-208ENST00000542557 FESP07332 822 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms