RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 ARMC12Q5T9G4 340 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 CRTC1Q6UUV9 634 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 RD3Q7Z3Z2 195 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 CBARPQ8N350 705 aaPredicted RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 LSM14AQ8ND56 463 aaKnown RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 WDR36Q8NI36 951 aaKnown RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 PDCD6IPQ8WUM4 868 aaKnown RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 MAML1Q92585 1016 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 SCRN2Q96FV2 425 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 FCRL3Q96P31 734 aaPredicted RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 DPH1Q9BZG8 443 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 POLR1EQ9GZS1 481 aaKnown RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 PHPT1Q9NRX4 125 aaPredicted RBP15.65■□□□□ 0.1
VPS33A-206ENST00000542310 IFNKQ9P0W0 207 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 SIRPGQ9P1W8 387 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 GULP1Q9UBP9 304 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 APPL1Q9UKG1 709 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 DNPEPQ9ULA0 475 aa15.65■□□□□ 0.1
VPS33A-206ENST00000542310 TEX51A0A1B0GUA7 166 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 A0A1W2PNU3 283 aaPredicted RBP15.64■□□□□ 0.09
VPS33A-206ENST00000542310 CDRT15L2A8MXV6 281 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 TK2O00142 265 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 PROSCO94903 275 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 GLB1P16278 677 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 LHCGRP22888 699 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 RBMS1P29558 406 aaKnown RBP15.64■□□□□ 0.09
VPS33A-206ENST00000542310 MAN1A1P33908 653 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 MAXP61244 160 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 COL9A2Q14055 689 aaPredicted RBP15.64■□□□□ 0.09
VPS33A-206ENST00000542310 PDK2Q15119 407 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 BROXQ5VW32 411 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 KCTD16Q68DU8 428 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 NCBP2-AS2Q69YL0 99 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 OGFOD3Q6PK18 319 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 CLEC14AQ86T13 490 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 NDUFAF2Q8N183 169 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 CPLX3Q8WVH0 158 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 KCNE4Q8WWG9 221 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 FAF2Q96CS3 445 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 CCDC97Q96F63 343 aaPredicted RBP15.64■□□□□ 0.09
VPS33A-206ENST00000542310 PRR11Q96HE9 360 aaPredicted RBP15.64■□□□□ 0.09
VPS33A-206ENST00000542310 SLC46A1Q96NT5 459 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 BBC3Q96PG8 261 aaPredicted RBP15.64■□□□□ 0.09
VPS33A-206ENST00000542310 TEX101Q9BY14 249 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 UNC13CQ8NB66 2214 aa15.64■□□□□ 0.09
VPS33A-206ENST00000542310 BAHCC1Q9P281 2608 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 TTC24A2A3L6 582 aaPredicted RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 NPIPB15A6NHN6 443 aaPredicted RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 FZD6O60353 706 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 ITGA2BP08514 1039 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 KRT7P08729 469 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 CD48P09326 243 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 H2AFZP0C0S5 128 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 CA4P22748 312 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 CES1P23141 567 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 CASP14P31944 242 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 CCKBRP32239 447 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 SSR1P43307 286 aaKnown RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 TMPRSS3P57727 454 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 DPTQ07507 201 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 MMRN1Q13201 1228 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 ARHGEF7Q14155 803 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 SLC18A3Q16572 532 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 IFI16Q16666 785 aaKnown RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 C14orf28Q4W4Y0 310 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 CERCAMQ5T4B2 595 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 NYAP1Q6ZVC0 841 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 H2AFVQ71UI9 128 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 GPR155Q7Z3F1 870 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 TAF8Q7Z7C8 310 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 HEATR4Q86WZ0 1026 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 MAP7D3Q8IWC1 876 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 RAVER1Q8IY67 606 aaKnown RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 PELI3Q8N2H9 469 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 ARL14Q8N4G2 192 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 KIAA1524Q8TCG1 905 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 CTNNBL1Q8WYA6 563 aaPredicted RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 TMEM74Q96NL1 305 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 TSGA13Q96PP4 275 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 GFM1Q96RP9 751 aaKnown RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 LGR4Q9BXB1 951 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 FRMD8Q9BZ67 464 aaPredicted RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 SYNDIG1Q9H7V2 258 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 NT5MQ9NPB1 228 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 MRPL40Q9NQ50 206 aaKnown RBP15.63■□□□□ 0.09
VPS33A-206ENST00000542310 RABGEF1Q9UJ41 708 aa15.63■□□□□ 0.09
VPS33A-206ENST00000542310 SSU72P8A0A1W2PR75 194 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 EIF4E1BA6NMX2 242 aaKnown RBP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 ZNF487B1APH4 448 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 ATXN7O15265 892 aaPredicted RBP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 CBFA2T2O43439 604 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 NUDT21O43809 227 aaKnown RBP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 NOBOXO60393 691 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 RPLP0P05388 317 aaKnown RBP15.62■□□□□ 0.09
VPS33A-206ENST00000542310 PYGLP06737 847 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 ZNF30P17039 623 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 MX2P20592 715 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 CCNCP24863 283 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 CDK3Q00526 305 aa15.62■□□□□ 0.09
VPS33A-206ENST00000542310 PEX6Q13608 980 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms