RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 DHRSXQ8N5I4 330 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 DBF4BQ8NFT6 615 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 TPD52L3Q96J77 140 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 CCSER2Q9H7U1 834 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 ZNF229Q9UJW7 825 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 PTGDR2Q9Y5Y4 395 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 M0R3G1 203 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 IRAK2O43187 625 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 GLUD2P49448 558 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 FAM187BQ17R55 369 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 ZNF621Q6ZSS3 439 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 HORMAD1Q86X24 394 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 MAPK15Q8TD08 544 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 C19orf60Q96EN9 201 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 TRAPPC9Q96Q05 1148 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 LNPEPQ9UIQ6 1025 aa16.12■□□□□ 0.17
VARS2-212ENST00000542001 USP54Q70EL1 1684 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 MYADML2A6NDP7 307 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 PIP5K1BO14986 540 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 HECTD3Q5T447 861 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ATXN7L2Q5T6C5 722 aaPredicted RBP16.11■□□□□ 0.17
VARS2-212ENST00000542001 ZFP1Q6P2D0 407 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ATG16L2Q8NAA4 619 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ITFG1Q8TB96 612 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 TSSK3Q96PN8 268 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 TMEM161AQ9NX61 479 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 FETUBQ9UGM5 382 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 RAD54BQ9Y620 910 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 CCDC162PA2VCL2 907 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ALDH1A1P00352 501 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 BFSP2Q13515 415 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 TNKS2Q9H2K2 1166 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 GPBP1L1Q9HC44 474 aaPredicted RBP16.11■□□□□ 0.17
VARS2-212ENST00000542001 PRKAG2Q9UGJ0 569 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 DHRS12A0PJE2 317 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.11■□□□□ 0.17
VARS2-212ENST00000542001 PIRO00625 290 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ENPP3O14638 875 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 CNMDO75829 334 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 C1RP00736 705 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 URODP06132 367 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 MTHFD1P11586 935 aaKnown RBP16.11■□□□□ 0.17
VARS2-212ENST00000542001 PROZP22891 400 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 GATMP50440 423 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 CDH15P55291 814 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 PFKPQ01813 784 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 MSLNQ13421 630 aaPredicted RBP16.11■□□□□ 0.17
VARS2-212ENST00000542001 BTG3Q14201 252 aaPredicted RBP16.11■□□□□ 0.17
VARS2-212ENST00000542001 MAPK11Q15759 364 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 TTLL9Q3SXZ7 439 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ALFQ53S48 1182 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 TSTD2Q5T7W7 516 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 FAM45BPQ6NSW5 357 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ZNF280BQ86YH2 543 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 FAM45AQ8TCE6 357 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 YME1L1Q96TA2 773 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ACBD6Q9BR61 282 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 ALG2Q9H553 416 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 CNTN3Q9P232 1028 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 FKBPLQ9UIM3 349 aa16.11■□□□□ 0.17
VARS2-212ENST00000542001 COPG1Q9Y678 874 aaKnown RBP16.11■□□□□ 0.17
VARS2-212ENST00000542001 MAN1A2O60476 641 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 ITGB1P05556 798 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 CCNCP24863 283 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 CYP2C18P33260 490 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 GJA5P36382 358 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 BCL2L1Q07817 233 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 SQLEQ14534 574 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 BRMS1LQ5PSV4 323 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 FBXL22Q6P050 247 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 TTC23LQ6PF05 361 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 PAQR3Q6TCH7 311 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 ASRGL1Q7L266 308 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 OR10Q1Q8NGQ4 319 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 PNPT1Q8TCS8 783 aaKnown RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 TWIST2Q8WVJ9 160 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 OXSMQ9NWU1 459 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 EVLQ9UI08 416 aaPredicted RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 ZNF7P17097 686 aaPredicted RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 CLK1P49759 484 aaKnown RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 PRKCZQ05513 592 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 LIN52Q52LA3 116 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 UGT3A1Q6NUS8 523 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 ANKRD46Q86W74 232 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 SCLYQ96I15 445 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 ZDHHC6Q9H6R6 413 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 POLR1BQ9H9Y6 1135 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 EIF2B4Q9UI10 523 aaKnown RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 E7ENX8 843 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 NIPSNAP2O75323 286 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 CLIC3O95833 236 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 F2P00734 622 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 HSMCR30P0CW71 290 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 AQP1P29972 269 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 CCDC85BQ15834 202 aaPredicted RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 AARS2Q5JTZ9 985 aaKnown RBP16.1■□□□□ 0.17
VARS2-212ENST00000542001 IL23RQ5VWK5 629 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 RETSATQ6NUM9 610 aa16.1■□□□□ 0.17
VARS2-212ENST00000542001 CBR4Q8N4T8 237 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms