RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 MARC1Q5VT66 337 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 NCBP2-AS2Q69YL0 99 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 ALG1LQ6GMV1 187 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 TMPRSS9Q7Z410 1059 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 GKN2Q86XP6 184 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 PQLC3Q8N755 202 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 GPBAR1Q8TDU6 330 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 SCG3Q8WXD2 468 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 MAML1Q92585 1016 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 DTD2Q96FN9 168 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 NAF1Q96HR8 494 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 FCRL3Q96P31 734 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 TSGA13Q96PP4 275 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 UBL7Q96S82 380 aaPredicted RBP11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 SPATS2LQ9NUQ6 558 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 APPL1Q9UKG1 709 aa11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 LUC7L2Q9Y383 392 aaKnown RBP11.82□□□□□ -0.52
CLSTN3-211ENST00000541667 KALRNO60229 2985 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 A0A1W2PQ67 120 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 MYO1FO00160 1098 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 CACNB4O00305 520 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 ATXN7O15265 892 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 EFSO43281 561 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 B4GAT1O43505 415 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 PRB1P04280 392 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 FGF1P05230 155 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 CASP14P31944 242 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 ETV3P41162 512 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 GARSP41250 739 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 MMP13P45452 471 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 PCBP4P57723 403 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 B4GALNT1Q00973 533 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 PTSQ03393 145 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 ZFP36L1Q07352 338 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 ZNF235Q14590 738 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 RALGPS1Q5JS13 557 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 CERCAMQ5T4B2 595 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 Q6ZVL8 140 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 CLEC14AQ86T13 490 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 LRRC49Q8IUZ0 686 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 FAM46DQ8NEK8 389 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 ATL2Q8NHH9 583 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 WDR48Q8TAF3 677 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 ARRDC2Q8TBH0 407 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 LRRN4Q8WUT4 740 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 FATE1Q969F0 183 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 FAF2Q96CS3 445 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 SCARF2Q96GP6 870 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 PACSIN1Q9BY11 444 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 FRMD8Q9BZ67 464 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 LRRN3Q9H3W5 708 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 CYP4F12Q9HCS2 524 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 RNF215Q9Y6U7 377 aa11.81□□□□□ -0.52
CLSTN3-211ENST00000541667 PRSS38A1L453 326 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 TK2O00142 265 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 PSMD11O00231 422 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 MFSD11O43934 449 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 PROSCO94903 275 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 TNFSF15O95150 251 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 CPP00450 1065 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 RPLP0P05388 317 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 MYCLP1P12525 358 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 PNLIPP16233 465 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 GLB1P16278 677 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 CTPS1P17812 591 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 TEAD1P28347 426 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 POLD2P49005 469 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 CDK3Q00526 305 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 DPTQ07507 201 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 NIPAL4Q0D2K0 466 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 SPIDRQ14159 915 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 NFKBIBQ15653 356 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 ANKRD20A8PQ5CZ79 823 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 FAM182AQ5T1J6 154 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 GPR155Q7Z3F1 870 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 TAF8Q7Z7C8 310 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 NLRP8Q86W28 1048 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 ATPAF2Q8N5M1 289 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 OR6C4Q8NGE1 309 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 WDR36Q8NI36 951 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 ZNF564Q8TBZ8 553 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 PDCD6IPQ8WUM4 868 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 NUS1Q96E22 293 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 LIN37Q96GY3 246 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 WDR24Q96S15 920 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 AGAP2Q99490 1192 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 LGMNQ99538 433 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 SEMA3CQ99985 751 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 DPH1Q9BZG8 443 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 XPO4Q9C0E2 1151 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 ABCG8Q9H221 673 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 WDR26Q9H7D7 661 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 CPNE5Q9HCH3 593 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 NT5MQ9NPB1 228 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 THSD1Q9NS62 852 aa11.8□□□□□ -0.52
CLSTN3-211ENST00000541667 DOLKQ9UPQ8 538 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms