RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	REXO2	Q9Y3B8	237 aa	Known RBP	13.65	□□□□□ -0.22
POLE-215	ENST00000540987	PCDHA13	Q9Y5I0	950 aa		13.65	□□□□□ -0.22
POLE-215	ENST00000540987	HEY1	Q9Y5J3	304 aa		13.65	□□□□□ -0.22
POLE-215	ENST00000540987		A0A0J9YYE9	177 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CAPN8	A6NHC0	703 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CACNB4	O00305	520 aa	Predicted RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CASC3	O15234	703 aa	Known RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	YY2	O15391	372 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	PSTPIP1	O43586	416 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	OPA1	O60313	960 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	JCHAIN	P01591	159 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	TRBC1	P01850	177 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	ANXA6	P08133	673 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	JUP	P14923	745 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	HTR1B	P28222	390 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	TRIM23	P36406	574 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CDKN2B	P42772	138 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	SKOR1	P84550	965 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	PERM1	Q5SV97	790 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CDCP2	Q5VXM1	449 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	LRRC66	Q68CR7	880 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	C11orf63	Q6NUN7	778 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	PNCK	Q6P2M8	343 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CRTC1	Q6UUV9	634 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987		Q6ZVL8	140 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	TECPR1	Q7Z6L1	1165 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CCDC170	Q8IYT3	715 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	FSTL5	Q8N475	847 aa	Predicted RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	DCBLD1	Q8N8Z6	715 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	KY	Q8NBH2	561 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	LPCAT1	Q8NF37	534 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	TPCN2	Q8NHX9	752 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	PTCD2	Q8WV60	388 aa	Known RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	PANX2	Q96RD6	677 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	USP29	Q9HBJ7	922 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	MRPL40	Q9NQ50	206 aa	Known RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	DDX56	Q9NY93	547 aa	Known RBP	13.64	□□□□□ -0.23
POLE-215	ENST00000540987	DKK4	Q9UBT3	224 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	CHKB	Q9Y259	395 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	ALG6	Q9Y672	507 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	DMXL2	Q8TDJ6	3036 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987	ASXL3	Q9C0F0	2248 aa		13.64	□□□□□ -0.23
POLE-215	ENST00000540987		A0A0A6YYK5	440 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	PSMD11	O00231	422 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	MT-CO3	P00414	261 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	SOD1	P00441	154 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	GP1BA	P07359	652 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	HOXC4	P09017	264 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	MYCLP1	P12525	358 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	KRT10	P13645	584 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	PECAM1	P16284	738 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	CYLC1	P35663	651 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	CD86	P42081	329 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	DUSP3	P51452	185 aa	Predicted RBP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	STC1	P52823	247 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	ADCY2	Q08462	1091 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	CYP4F3	Q08477	520 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	LLGL1	Q15334	1064 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	NR0B2	Q15466	257 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	RAD9B	Q6WBX8	426 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	SPOCD1	Q6ZMY3	1216 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	RD3	Q7Z3Z2	195 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	HEATR4	Q86WZ0	1026 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	PDCD7	Q8N8D1	485 aa	Known RBP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	OR56A4	Q8NGH8	313 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	ATL2	Q8NHH9	583 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	KRT35	Q92764	455 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
POLE-215	ENST00000540987	BRD8	Q9H0E9	1235 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	CD84	Q9UIB8	345 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	CLCA2	Q9UQC9	943 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	PCDHB1	Q9Y5F3	818 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	DGKB	Q9Y6T7	804 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	ACACA	Q13085	2346 aa		13.63	□□□□□ -0.23
POLE-215	ENST00000540987	CHD6	Q8TD26	2715 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	ZFHX4	Q86UP3	3567 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	hCG_1818297	A0A087WSY0	165 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	CPED1	A4D0V7	1026 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	EME2	A4GXA9	379 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-215	ENST00000540987	NDUFA10	O95299	355 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	ZFX	P17010	805 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-215	ENST00000540987	CES1	P23141	567 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	BLK	P51451	505 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	E2F1	Q01094	437 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	AP1B1	Q10567	949 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	ARHGEF7	Q14155	803 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	PDK1	Q15118	436 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	PRKD1	Q15139	912 aa	Predicted RBP	13.62	□□□□□ -0.23
POLE-215	ENST00000540987	ELOC	Q15369	112 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	QPCT	Q16769	361 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	TMEM139	Q8IV31	216 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	SFTPA2	Q8IWL1	248 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	KATNAL2	Q8IYT4	538 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	CACTIN-AS1	Q8N1I8	211 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	ACRBP	Q8NEB7	543 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	NXPE2	Q96DL1	559 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	TEX101	Q9BY14	249 aa		13.62	□□□□□ -0.23
POLE-215	ENST00000540987	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms