RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 MTSS1O43312 755 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 KRT86O43790 486 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 DKK1O94907 266 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 C1SP09871 688 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 CCDC175P0C221 793 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 CA4P22748 312 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 NFKBIAP25963 317 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 RBL1P28749 1068 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 TRIM23P36406 574 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 EPHB1P54762 984 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 PTSQ03393 145 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 FOXC1Q12948 553 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 ARHGEF7Q14155 803 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 NFATC4Q14934 902 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 SLC14A2Q15849 920 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 KCTD16Q68DU8 428 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 ESRP1Q6NXG1 681 aaKnown RBP16.9■□□□□ 0.3
CD9-209ENST00000540891 PNCKQ6P2M8 343 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 Q6ZVL8 140 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 RBFAQ8N0V3 343 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 NDUFAF2Q8N183 169 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 ZNF567Q8N184 647 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 UBL4BQ8N7F7 174 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 PNPLA1Q8N8W4 532 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 FUBP1Q96AE4 644 aaKnown RBP16.9■□□□□ 0.3
CD9-209ENST00000540891 NUS1Q96E22 293 aa16.9■□□□□ 0.3
CD9-209ENST00000540891 ANKRD66B4E2M5 251 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 H7C0C1 242 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 TNFSF14O43557 240 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 TJP3O95049 919 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 JUNDP17535 347 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 NFKB1P19838 968 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 ATP5OP48047 213 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 STC1P52823 247 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 HNRNPKP61978 463 aaKnown RBP eCLIP16.89■□□□□ 0.29
CD9-209ENST00000540891 KLF1Q13351 362 aaPredicted RBP16.89■□□□□ 0.29
CD9-209ENST00000540891 GALNT3Q14435 633 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 CCDC181Q5TID7 509 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 ZNF548Q8NEK5 533 aaPredicted RBP16.89■□□□□ 0.29
CD9-209ENST00000540891 CNDP2Q96KP4 475 aaKnown RBP16.89■□□□□ 0.29
CD9-209ENST00000540891 VAT1Q99536 393 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 LGR4Q9BXB1 951 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 UBP1Q9NZI7 540 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 KLHL8Q9P2G9 620 aaPredicted RBP16.89■□□□□ 0.29
CD9-209ENST00000540891 FTSJ1Q9UET6 329 aa16.89■□□□□ 0.29
CD9-209ENST00000540891 ARID1BQ8NFD5 2236 aaPredicted RBP16.88■□□□□ 0.29
CD9-209ENST00000540891 TCRBV7S2A1N4TA0A589 114 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 FFAR2O15552 330 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 SIGLEC6O43699 453 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 CLDN7O95471 211 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 SOD1P00441 154 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 RBP3P10745 1247 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 ZNF30P17039 623 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 SPINK2P20155 84 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 KIAA1024LP59773 190 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 EIF3EP60228 445 aaKnown RBP16.88■□□□□ 0.29
CD9-209ENST00000540891 SHC2P98077 582 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 CDK18Q07002 472 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 PCSK7Q16549 785 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 ALG11Q2TAA5 492 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 PROX2Q3B8N5 592 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 KDELC1Q6UW63 502 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 ENPP7Q6UWV6 458 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 PID1Q7Z2X4 250 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 KDELC2Q7Z4H8 507 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 PHACTR4Q8IZ21 702 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 OR4C6Q8NH72 309 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 ADAMTS14Q8WXS8 1223 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 OXNAD1Q96HP4 312 aaPredicted RBP16.88■□□□□ 0.29
CD9-209ENST00000540891 FCRL5Q96RD9 977 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 GORASP1Q9BQQ3 440 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 MLPHQ9BV36 600 aaPredicted RBP16.88■□□□□ 0.29
CD9-209ENST00000540891 LRRC61Q9BV99 259 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 LZTFL1Q9NQ48 299 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 APOBEC3BQ9UH17 382 aaKnown RBP16.88■□□□□ 0.29
CD9-209ENST00000540891 CD84Q9UIB8 345 aa16.88■□□□□ 0.29
CD9-209ENST00000540891 TMEM202A6NGA9 273 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 F5H423 210 aaPredicted RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 H3BM21 787 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 ENC1O14682 589 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 SCAMP1O15126 338 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 HYAL3O43820 417 aaPredicted RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 PMPCBO75439 489 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 GCATO75600 419 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 LDOC1O95751 146 aaPredicted RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 HOXC4P09017 264 aaPredicted RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 CETN2P41208 172 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 PPARDQ03181 441 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 DPTQ07507 201 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 DNAJC3Q13217 504 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 RAB44Q7Z6P3 723 aaPredicted RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 CHCHD4Q8N4Q1 142 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 BTN2A2Q8WVV5 523 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 SCAMP4Q969E2 229 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 TSACCQ96A04 125 aaPredicted RBP16.87■□□□□ 0.29
CD9-209ENST00000540891 EID2BQ96D98 161 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 TBATAQ96M53 351 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 ADGRE3Q9BY15 652 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 ABCG8Q9H221 673 aa16.87■□□□□ 0.29
CD9-209ENST00000540891 KCTD5Q9NXV2 234 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms