RNA–Protein interactions for RNA: ENST00000540801.5

SSH2-204, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH2, Length 4,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-204ENST00000540801 SOX11P35716 441 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 CD86P42081 329 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 LEPRP48357 1165 aaKnown RBP6.2□□□□□ -1.42
SSH2-204ENST00000540801 IST1P53990 364 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 WNT3AP56704 352 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 B4GALNT1Q00973 533 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 CASC4Q6P4E1 433 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 SCIMPQ6UWF3 145 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 ST13P5Q8NFI4 369 aaPredicted RBP6.2□□□□□ -1.42
SSH2-204ENST00000540801 IPMKQ8NFU5 416 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 FICDQ9BVA6 458 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 WDCPQ9H6R7 721 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 SYNPO2LQ9H987 977 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 TBC1D13Q9NVG8 400 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 KCNG1Q9UIX4 513 aa6.2□□□□□ -1.42
SSH2-204ENST00000540801 OAS3Q9Y6K5 1087 aaKnown RBP6.2□□□□□ -1.42
SSH2-204ENST00000540801 F8W8V4 182 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 DFFAO00273 331 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 MATN3O15232 486 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 ETFBP38117 255 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 PPP2R5DQ14738 602 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 RABL3Q5HYI8 236 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 ZNF678Q5SXM1 525 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 SMYD5Q6GMV2 418 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 LRTOMTQ8WZ04 291 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 ALKBH8Q96BT7 664 aaKnown RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 CDRT15Q96T59 188 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 NACA2Q9H009 215 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 AP5M1Q9H0R1 490 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 TMEM181Q9P2C4 612 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 PRAMEF25A6NGN4 478 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 TAPBPO15533 448 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 SGTAO43765 313 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 TSPAN3O60637 253 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 FAM200BP0CF97 657 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 ESRRAP11474 423 aaPredicted RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 SUOXP51687 545 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 CLNS1AP54105 237 aaKnown RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 CDK18Q07002 472 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 CAPRIN1Q14444 709 aaKnown RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 SF1Q15637 639 aaKnown RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 MTX3Q5HYI7 312 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 ZNF648Q5T619 568 aaPredicted RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 ZNF470Q6ECI4 717 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 DCLRE1AQ6PJP8 1040 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 MBOAT1Q6ZNC8 495 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 DHDDSQ86SQ9 333 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 PLPP6Q8IY26 295 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 ABI1Q8IZP0 508 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 NME8Q8N427 588 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 BEST2Q8NFU1 509 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 OR7D4Q8NG98 312 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 ACBD6Q9BR61 282 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 MEAF6Q9HAF1 191 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 INTS7Q9NVH2 962 aaKnown RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 PCNX3Q9H6A9 2034 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 C17orf102A2RUQ5 167 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 CCDC162PA2VCL2 907 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 FKBP6O75344 327 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 OAZ2O95190 189 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 THP07101 528 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 CTSAP10619 480 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 TYK2P29597 1187 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 RAB27AP51159 221 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 MPP3Q13368 585 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 IQCCQ4KMZ1 466 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 GNASQ5JWF2 1037 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.19□□□□□ -1.42
SSH2-204ENST00000540801 FAM43BQ6ZT52 329 aaPredicted RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 SLC43A3Q8NBI5 491 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 HDAC10Q969S8 669 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 LMLNQ96KR4 655 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 SUSD3Q96L08 255 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 CPNE1Q99829 537 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 COPS7BQ9H9Q2 264 aaPredicted RBP6.19□□□□□ -1.42
SSH2-204ENST00000540801 TMEM184CQ9NVA4 438 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 VNN3Q9NY84 501 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 SLC25A37Q9NYZ2 338 aa6.19□□□□□ -1.42
SSH2-204ENST00000540801 PABPN1LA6NDY0 278 aaKnown RBP6.18□□□□□ -1.42
SSH2-204ENST00000540801 HACD1B0YJ81 288 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 AIM2O14862 343 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 AP1G1O43747 822 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 MOCS2O96007 188 aaPredicted RBP6.18□□□□□ -1.42
SSH2-204ENST00000540801 MTHFD1P11586 935 aaKnown RBP6.18□□□□□ -1.42
SSH2-204ENST00000540801 EPHA2P29317 976 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 ABCD1P33897 745 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 ZNF140P52738 457 aaPredicted RBP6.18□□□□□ -1.42
SSH2-204ENST00000540801 PPP1R8Q12972 351 aaKnown RBP6.18□□□□□ -1.42
SSH2-204ENST00000540801 LINGO4Q6UY18 593 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 WDR53Q7Z5U6 358 aaPredicted RBP6.18□□□□□ -1.42
SSH2-204ENST00000540801 RAET1EQ8TD07 263 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 AKTIPQ9H8T0 292 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 CHST12Q9NRB3 414 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.18□□□□□ -1.42
SSH2-204ENST00000540801 INVSQ9Y283 1065 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 TIMM22Q9Y584 194 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 MAP1BP46821 2468 aaKnown RBP6.18□□□□□ -1.42
SSH2-204ENST00000540801 FAM95CA0A1B0GW59 222 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 ANKRD33BA6NCL7 494 aa6.18□□□□□ -1.42
SSH2-204ENST00000540801 DRGXA6NNA5 263 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms