RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 ZNF574Q6ZN55 896 aaPredicted RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 GCNT7Q6ZNI0 430 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 RFLNAQ6ZTI6 216 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 PRPF39Q86UA1 669 aaKnown RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 ZC3H18Q86VM9 953 aaKnown RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 LRRC49Q8IUZ0 686 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 CCDC50Q8IVM0 306 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 PELI3Q8N2H9 469 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 SAP25Q8TEE9 199 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 SNRNP27Q8WVK2 155 aaKnown RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 PIH1D2Q8WWB5 315 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 FATE1Q969F0 183 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 HES6Q96HZ4 224 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 PPP1R16AQ96I34 528 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 PDLIM2Q96JY6 352 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 ZNF641Q96N77 438 aaPredicted RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 SLC17A9Q9BYT1 436 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 OSBPL8Q9BZF1 889 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 BRD8Q9H0E9 1235 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 LZTFL1Q9NQ48 299 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 AMFRQ9UKV5 643 aa11.46□□□□□ -0.57
TMEM258-205ENST00000540434 PNMA8BQ9ULN7 279 aaPredicted RBP11.46□□□□□ -0.57
TMEM258-205ENST00000540434 AHCTF1Q8WYP5 2266 aa11.46□□□□□ -0.58
TMEM258-205ENST00000540434 VILLO15195 856 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 MPOP05164 745 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 CTPS1P17812 591 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 PTPN3P26045 913 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 CD38P28907 300 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 RENBPP51606 427 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 PCBP4P57723 403 aaKnown RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 IFI35P80217 286 aaPredicted RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 SKOR1P84550 965 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 ITKQ08881 620 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 VAC14Q08AM6 782 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 UBAP2LQ14157 1087 aaKnown RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 PPP2R5EQ16537 467 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 KCTD19Q17RG1 926 aaPredicted RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 ALG1LQ6GMV1 187 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 NAPEPLDQ6IQ20 393 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 NEK5Q6P3R8 708 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 BBS12Q6ZW61 710 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 PEX26Q7Z412 305 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 TSPAN33Q86UF1 283 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 REXO1L1PQ8IX06 675 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 SLC22A18ASQ8N1D0 253 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 EID2Q8N6I1 236 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 HCAR2Q8TDS4 363 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 CENPTQ96BT3 561 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 HIC2Q96JB3 615 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 FEM1CQ96JP0 617 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 AGAP3Q96P47 875 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 TUBGCP5Q96RT8 1024 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 ELF4Q99607 663 aaPredicted RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 ATP13A3Q9H7F0 1226 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 AASDHPPTQ9NRN7 309 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 SEPT10Q9P0V9 454 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 R3HDM2Q9Y2K5 976 aaKnown RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 PPP2R2CQ9Y2T4 447 aa11.45□□□□□ -0.58
TMEM258-205ENST00000540434 TDRD6O60522 2096 aaKnown RBP11.45□□□□□ -0.58
TMEM258-205ENST00000540434 CCDC66A2RUB6 948 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 GOLGA6L6A8MZA4 724 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 F5H423 210 aaPredicted RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 TLR4O00206 839 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 TSPAN6O43657 245 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 PGLSO95336 258 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 ALPIP09923 528 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 MX2P20592 715 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 LHCGRP22888 699 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 SERPINA4P29622 427 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 MMP12P39900 470 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 LIG3P49916 1009 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 RWDD2BP57060 319 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 AP1S1P61966 158 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 RPS21P63220 83 aaKnown RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 OTUD4Q01804 1114 aaKnown RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 BNIP3Q12983 259 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 TFDP2Q14188 446 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 PDK1Q15118 436 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 KCTD16Q68DU8 428 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 LIPIQ6XZB0 460 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 ZNF662Q6ZS27 426 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 CBARPQ8N350 705 aaPredicted RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 RNF10Q8N5U6 811 aaKnown RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 DCBLD1Q8N8Z6 715 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 TP53I13Q8NBR0 393 aaPredicted RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 PLA2G15Q8NCC3 412 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 CCDC112Q8NEF3 446 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 OR13H1Q8NG92 308 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 SPATA22Q8NHS9 363 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 ACTL9Q8TC94 416 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 PDCD6IPQ8WUM4 868 aaKnown RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 KCNE4Q8WWG9 221 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 RAB7BQ96AH8 199 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 TADA1Q96BN2 335 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 RBM41Q96IZ5 413 aaKnown RBP11.44□□□□□ -0.58
TMEM258-205ENST00000540434 GORASP1Q9BQQ3 440 aa11.44□□□□□ -0.58
TMEM258-205ENST00000540434 B4GALT6Q9UBX8 382 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms