RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 HDAC3O15379 428 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 GYG2O15488 501 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 TLL1O43897 1013 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 GREM1O60565 184 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 TOP3BO95985 862 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 KITP10721 976 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 ITGB8P26012 769 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 HNRNPH1P31943 449 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 CTNNB1P35222 781 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 SGSHP51688 502 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 CLCN4P51793 760 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 ADARP55265 1226 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 SNRPD1P62314 119 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 IRX1P78414 480 aaPredicted RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 NFKB2Q00653 900 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 PFKPQ01813 784 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 SATB1Q01826 763 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 RAD51Q06609 339 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 BCL2L1Q07817 233 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 SMAD1Q15797 465 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 TECRLQ5HYJ1 363 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 SH2D4BQ5SQS7 431 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 WASHC2DQ5SRD0 308 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 ZDHHC20Q5W0Z9 365 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 FBXW10Q5XX13 1052 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 CNSTQ6PJW8 725 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 TMPRSS6Q8IU80 811 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 SUGP1Q8IWZ8 645 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 NKAPQ8N5F7 415 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 MAB21L3Q8N8X9 362 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 OR52K2Q8NGK3 314 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 RHEBL1Q8TAI7 183 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 ADAMTS19Q8TE59 1207 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 MCUR1Q96AQ8 359 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 ISG20Q96AZ6 181 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 NXNL1Q96CM4 212 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 PTCD3Q96EY7 689 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 MYO19Q96H55 970 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 UBXN10Q96LJ8 280 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 AARSD1Q9BTE6 412 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 GATA5Q9BWX5 397 aaPredicted RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 CEP44Q9C0F1 390 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 NMUR2Q9GZQ4 415 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 C1orf21Q9H246 121 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 TFB2MQ9H5Q4 396 aaKnown RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 ATP13A3Q9H7F0 1226 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 TLR9Q9NR96 1032 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 ABCB8Q9NUT2 735 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 LHX3Q9UBR4 397 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 MARCOQ9UEW3 520 aaPredicted RBP10.18□□□□□ -0.78
SPARC-209ENST00000539687 SLC25A13Q9UJS0 675 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 APPL1Q9UKG1 709 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 PCDHB1Q9Y5F3 818 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 ARL5AQ9Y689 179 aa10.18□□□□□ -0.78
SPARC-209ENST00000539687 A0A1W2PRU2 124 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 C2orf71A6NGG8 1288 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 C5orf67F2Z3F1 127 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 H3BMM5 538 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 TK2O00142 265 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 LEFTY2O00292 366 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 HGSO14964 777 aaPredicted RBP10.17□□□□□ -0.78
SPARC-209ENST00000539687 ITM2AO43736 263 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 FZD6O60353 706 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 VPS26AO75436 327 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 IPO13O94829 963 aaKnown RBP10.17□□□□□ -0.78
SPARC-209ENST00000539687 PGLSO95336 258 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 ESR1P03372 595 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 LINC00271P0C7V0 271 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 TPBGLP0DKB5 382 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 GLDCP23378 1020 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 SERPINA4P29622 427 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 PTGER3P43115 390 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 IDH3AP50213 366 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 ARSDP51689 593 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CYP4F8P98187 520 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CACNG1Q06432 222 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CSHL1Q14406 222 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 C6orf163Q5TEZ5 329 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 EPGNQ6UW88 154 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 GAREM2Q75VX8 874 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 TMCO2Q7Z6W1 182 aaPredicted RBP10.17□□□□□ -0.78
SPARC-209ENST00000539687 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CEP97Q8IW35 865 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 PAF1Q8N7H5 531 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 HEXDCQ8WVB3 486 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 ALG14Q96F25 216 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 GPR78Q96P69 363 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CYP2S1Q96SQ9 504 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CORO1BQ9BR76 489 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 SLC2A11Q9BYW1 496 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 PFDN4Q9NQP4 134 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 IGSF5Q9NSI5 407 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 ZNF358Q9NW07 568 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 ZDHHC7Q9NXF8 308 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CPSF2Q9P2I0 782 aaKnown RBP10.17□□□□□ -0.78
SPARC-209ENST00000539687 SLC30A1Q9Y6M5 507 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 SZT2Q5T011 3432 aa10.17□□□□□ -0.78
SPARC-209ENST00000539687 CAPN14A8MX76 684 aa10.16□□□□□ -0.78
SPARC-209ENST00000539687 MATN2O00339 956 aa10.16□□□□□ -0.78
SPARC-209ENST00000539687 HTRA2O43464 458 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms