RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PIP5K1BO14986 540 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 CYBAP13498 195 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 OR1E1P30953 314 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 CYP2C18P33260 490 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 RENBPP51606 427 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 TAF10Q12962 218 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 HMBOX1Q6NT76 420 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 NUP93Q8N1F7 819 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 LINC01599Q8WXQ3 324 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 PIF1Q9H611 641 aa14.08□□□□□ -0.16
UBE3B-210ENST00000539599 SEMA4BQ9NPR2 832 aaPredicted RBP14.08□□□□□ -0.16
UBE3B-210ENST00000539599 AP3B1O00203 1094 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 ENPP3O14638 875 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 ZNF623O75123 536 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 ATP6V1B2P21281 511 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 AGTR2P50052 363 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 RAB27AP51159 221 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 DNAJB13P59910 316 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 ZNF33AQ06730 810 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 MBTPS1Q14703 1052 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 POLD3Q15054 466 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-210ENST00000539599 NADSYN1Q6IA69 706 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 KLC3Q6P597 504 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 CHSY3Q70JA7 882 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 HERC6Q8IVU3 1022 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 C19orf60Q96EN9 201 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 HBEGFQ99075 208 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 SLC30A3Q99726 388 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 TUBB1Q9H4B7 451 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBE3B-210ENST00000539599 USP22Q9UPT9 525 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 TLR6Q9Y2C9 796 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 SPO11Q9Y5K1 396 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 HEMK1Q9Y5R4 338 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-210ENST00000539599 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-210ENST00000539599 CDK14O94921 469 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 MT-ND1P03886 318 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 CD1DP15813 335 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 FLT3LGP49771 235 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 CLCN5P51795 746 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 ZNF135P52742 658 aaPredicted RBP14.07□□□□□ -0.16
UBE3B-210ENST00000539599 TRIM25Q14258 630 aaKnown RBP14.07□□□□□ -0.16
UBE3B-210ENST00000539599 UMODL1-AS1Q8N2C9 162 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 FBXO32Q969P5 355 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 MRM3Q9HC36 420 aaKnown RBP14.07□□□□□ -0.16
UBE3B-210ENST00000539599 ASB1Q9Y576 335 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 V9GYQ6 96 aa14.07□□□□□ -0.16
UBE3B-210ENST00000539599 MROH6A6NGR9 719 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 PDLIM1O00151 329 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 RAMP2O60895 175 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 SNRPB2P08579 225 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 SLC2A3P11169 496 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 ZNF26P17031 533 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 CAPN3P20807 821 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 FMO4P31512 558 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 GRIA3P42263 894 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 DIO3P55073 304 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 HERC3Q15034 1050 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 ACAP2Q15057 778 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 SLC5A9Q2M3M2 681 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 VARS2Q5ST30 1063 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 LARP4Q71RC2 724 aaKnown RBP eCLIP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 SETD3Q86TU7 594 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 MARVELD2Q8N4S9 558 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 PPWD1Q96BP3 646 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 TEX37Q96LM6 180 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 GPR62Q9BZJ7 368 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 FAM192AQ9GZU8 254 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 BPIFA1Q9NP55 256 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 DDX18Q9NVP1 670 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 AP4S1Q9Y587 144 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 SAC3D1A6NKF1 404 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 TRIM24O15164 1050 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 CD3EAPO15446 510 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 MTHFD2P13995 350 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 PSMC3P17980 439 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 IMPDH1P20839 514 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 DNAJB2P25686 324 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 SQLEQ14534 574 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 MYLK3Q32MK0 819 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 UGT3A2Q3SY77 523 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 HABP4Q5JVS0 413 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 MAP3K21Q5TCX8 1036 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 ZNF598Q86UK7 904 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 MON1AQ86VX9 555 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 IFNEQ86WN2 208 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 PTCD2Q8WV60 388 aaKnown RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 CANT1Q8WVQ1 401 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 VPS33AQ96AX1 596 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 ASB9Q96DX5 294 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 CCDC97Q96F63 343 aaPredicted RBP14.06□□□□□ -0.16
UBE3B-210ENST00000539599 BTBD9Q96Q07 612 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 SPON2Q9BUD6 331 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 MARCH2Q9P0N8 246 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 AURKCQ9UQB9 309 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 RNF11Q9Y3C5 154 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 Q9Y3F1 56 aa14.06□□□□□ -0.16
UBE3B-210ENST00000539599 GREB1Q4ZG55 1949 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms