RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 NPAS2Q99743 824 aa14.59□□□□□ -0.07
CDCA3-207ENST00000538862 ADAM2Q99965 735 aa14.59□□□□□ -0.07
CDCA3-207ENST00000538862 EPS15L1Q9UBC2 864 aa14.59□□□□□ -0.07
CDCA3-207ENST00000538862 HS3ST4Q9Y661 456 aa14.59□□□□□ -0.07
CDCA3-207ENST00000538862 MIA3Q5JRA6 1907 aa14.59□□□□□ -0.07
CDCA3-207ENST00000538862 SPTBN5Q9NRC6 3674 aaKnown RBP14.59□□□□□ -0.07
CDCA3-207ENST00000538862 C15orf38-AP3S2A0A0A6YYH1 394 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 A8MT66 165 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 PEX11BO96011 259 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 POMCP01189 267 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 HNRNPLP14866 589 aaKnown RBP eCLIP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 TYMPP19971 482 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 GRIK1P39086 918 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 GATMP50440 423 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 SH3BGRP55822 239 aaPredicted RBP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 TUSC3Q13454 348 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 PTK2BQ14289 1009 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 PAN2Q504Q3 1202 aaKnown RBP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 RBM20Q5T481 1227 aaKnown RBP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 ARPINQ7Z6K5 226 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 UMODL1-AS1Q8N2C9 162 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 ASB9Q96DX5 294 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 TMA16Q96EY4 203 aaKnown RBP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 SUSD3Q96L08 255 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 GAS2L1Q99501 681 aaPredicted RBP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 OLFM1Q99784 485 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 C17orf80Q9BSJ5 609 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 TRMOQ9BU70 441 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 UNKQ9C0B0 810 aaKnown RBP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 ATXN3LQ9H3M9 355 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 MPP6Q9NZW5 540 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 CNOT11Q9UKZ1 510 aaKnown RBP14.58□□□□□ -0.07
CDCA3-207ENST00000538862 SARDHQ9UL12 918 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 COMMD3-BMI1R4GMX3 469 aa14.58□□□□□ -0.07
CDCA3-207ENST00000538862 COL4A6Q14031 1691 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 AURKAO14965 403 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 UBDO15205 165 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 SLC7A4O43246 635 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 SLC2A3P11169 496 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 PSME3P61289 254 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 RBBP5Q15291 538 aaKnown RBP14.58□□□□□ -0.08
CDCA3-207ENST00000538862 C14orf80Q86SX3 495 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 MAFAQ8NHW3 353 aaPredicted RBP14.58□□□□□ -0.08
CDCA3-207ENST00000538862 SUDS3Q9H7L9 328 aaPredicted RBP14.58□□□□□ -0.08
CDCA3-207ENST00000538862 COPS7BQ9H9Q2 264 aaPredicted RBP14.58□□□□□ -0.08
CDCA3-207ENST00000538862 VCX3AQ9NNX9 186 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 SUCOQ9UBS9 1254 aaKnown RBP14.58□□□□□ -0.08
CDCA3-207ENST00000538862 PCDHGA7Q9Y5G6 932 aa14.58□□□□□ -0.08
CDCA3-207ENST00000538862 MYO7AQ13402 2215 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 A0A0U1RQF3 1178 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 NEMP2A6NFY4 417 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 STX16-NPEPL1H3BU86 382 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 CRTAMO95727 393 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 CCDC166P0CW27 439 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 IMPDH1P20839 514 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 MSX2P35548 267 aaPredicted RBP14.57□□□□□ -0.08
CDCA3-207ENST00000538862 GRIA2P42262 883 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 TRAP1Q12931 704 aaKnown RBP14.57□□□□□ -0.08
CDCA3-207ENST00000538862 DYNC1I2Q13409 638 aaKnown RBP14.57□□□□□ -0.08
CDCA3-207ENST00000538862 LRP8Q14114 963 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 TRIM25Q14258 630 aaKnown RBP14.57□□□□□ -0.08
CDCA3-207ENST00000538862 PCSK7Q16549 785 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 HECTD2Q5U5R9 776 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 GK5Q6ZS86 529 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 KDELC2Q7Z4H8 507 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 CUZD1Q86UP6 607 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 LILRA2Q8N149 483 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 NOL6Q9H6R4 1146 aaKnown RBP14.57□□□□□ -0.08
CDCA3-207ENST00000538862 NMUR1Q9HB89 426 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 PLK2Q9NYY3 685 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 TLR6Q9Y2C9 796 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 VWA7Q9Y334 891 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 AP4B1Q9Y6B7 739 aa14.57□□□□□ -0.08
CDCA3-207ENST00000538862 A0A1W2PQH9 124 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 MROH6A6NGR9 719 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 H0YJX3 145 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 PSMD12O00232 456 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 GPC4O75487 556 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 WISP3O95389 354 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 MOCS2O96007 188 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 RHOQP17081 205 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 KCNA5P22460 613 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 PMLP29590 882 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 PGFP49763 221 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 TNK2Q07912 1038 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 FASTKQ14296 549 aaKnown RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 DSC3Q14574 896 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 CCDC85BQ15834 202 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 ZNF789Q5FWF6 425 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 ZNF280DQ6N043 979 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 MSANTD2Q6P1R3 559 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 CILP2Q8IUL8 1156 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 CRIPAKQ8N1N5 446 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 RNF148Q8N7C7 305 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 OR13J1Q8NGT2 312 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 RIN3Q8TB24 985 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 SLC39A13Q96H72 371 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 KLHL32Q96NJ5 620 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 NDNQ99608 321 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms