RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 STC1P52823 247 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 NAP1L1P55209 391 aaKnown RBP13.72□□□□□ -0.21
CD9-208ENST00000538834 KIAA1024LP59773 190 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 ITKQ08881 620 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 INPP5AQ14642 412 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 PNCKQ6P2M8 343 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 USP45Q70EL2 814 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 ZNF765Q7L2R6 523 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 PTAR1Q7Z6K3 402 aaPredicted RBP13.72□□□□□ -0.21
CD9-208ENST00000538834 SLCO6A1Q86UG4 719 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 ZC3H18Q86VM9 953 aaKnown RBP13.72□□□□□ -0.21
CD9-208ENST00000538834 PARGQ86W56 976 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 GATAD2AQ86YP4 633 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 CCDC50Q8IVM0 306 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 SLC35B2Q8TB61 432 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 RBM15Q96T37 977 aaKnown RBP eCLIP13.72□□□□□ -0.21
CD9-208ENST00000538834 CDC6Q99741 560 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 TEX101Q9BY14 249 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 TRHDEQ9UKU6 1024 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 GUCA1BQ9UMX6 200 aa13.72□□□□□ -0.21
CD9-208ENST00000538834 LY6G6EA0A0G2JKS1 128 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 A0A0U1RQS6 177 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 SPAARA0A1B0GVQ0 90 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 TCRBV7S2A1N4TA0A589 114 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 K7ESM1 405 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 LZTS3O60299 673 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 MT-CYBP00156 380 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 C1SP09871 688 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 CTPS1P17812 591 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 NFKBIAP25963 317 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 RBL1P28749 1068 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 HNRNPKP61978 463 aaKnown RBP eCLIP13.71□□□□□ -0.21
CD9-208ENST00000538834 IL9RQ01113 521 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 ZNF211Q13398 564 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 MSLNQ13421 630 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 PDE1CQ14123 709 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 PTK2BQ14289 1009 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 NFATC4Q14934 902 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 PROX2Q3B8N5 592 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 LRRC66Q68CR7 880 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 KCTD16Q68DU8 428 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 RFLNAQ6ZTI6 216 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 Q6ZVL8 140 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 RAB44Q7Z6P3 723 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 UBL4BQ8N7F7 174 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 FAM181AQ8N9Y4 354 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 OR4C6Q8NH72 309 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 SPATA22Q8NHS9 363 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 RHBDD1Q8TEB9 315 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 PDCD6IPQ8WUM4 868 aaKnown RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 ADAMTS14Q8WXS8 1223 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 SCARF2Q96GP6 870 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 OXNAD1Q96HP4 312 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 TLR10Q9BXR5 811 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 MAGEE1Q9HCI5 957 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 UCKL1Q9NWZ5 548 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 NFKBIL1Q9UBC1 381 aaPredicted RBP13.71□□□□□ -0.21
CD9-208ENST00000538834 DNPEPQ9ULA0 475 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 PPP2R2CQ9Y2T4 447 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 DGKBQ9Y6T7 804 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 U3KQA8 63 aa13.71□□□□□ -0.21
CD9-208ENST00000538834 KIF26BQ2KJY2 2108 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 A8MX80 341 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 TRIM38O00635 465 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 TPP1O14773 563 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 TNFRSF10CO14798 259 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 SCAMP1O15126 338 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 TNFSF14O43557 240 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 FUCA1P04066 466 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 ATXN1LP0C7T5 689 aaKnown RBP13.7□□□□□ -0.22
CD9-208ENST00000538834 RBP3P10745 1247 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 NFKB1P19838 968 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 CA4P22748 312 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 ETV3P41162 512 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 CDK18Q07002 472 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 SIX1Q15475 284 aaPredicted RBP13.7□□□□□ -0.22
CD9-208ENST00000538834 NYAP1Q6ZVC0 841 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 TMC3Q7Z5M5 1100 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 REXO1L1PQ8IX06 675 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 NRSN1Q8IZ57 195 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 NDUFAF2Q8N183 169 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 TTC13Q8NBP0 860 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 HAUS1Q96CS2 278 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 RTP4Q96DX8 246 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 MRGPRX2Q96LB1 330 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 MLPHQ9BV36 600 aaPredicted RBP13.7□□□□□ -0.22
CD9-208ENST00000538834 LGR4Q9BXB1 951 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 CLPBQ9H078 707 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 ABCG8Q9H221 673 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 CARD9Q9H257 536 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 TCEAL2Q9H3H9 227 aaPredicted RBP13.7□□□□□ -0.22
CD9-208ENST00000538834 KCNF1Q9H3M0 494 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 C10orf88Q9H8K7 445 aa13.7□□□□□ -0.22
CD9-208ENST00000538834 R3HDM2Q9Y2K5 976 aaKnown RBP13.7□□□□□ -0.22
CD9-208ENST00000538834 MAP1BP46821 2468 aaKnown RBP13.69□□□□□ -0.22
CD9-208ENST00000538834 RGSL1A5PLK6 1076 aa13.69□□□□□ -0.22
CD9-208ENST00000538834 C5orf60A6NFR6 353 aa13.69□□□□□ -0.22
CD9-208ENST00000538834 TMEM202A6NGA9 273 aa13.69□□□□□ -0.22
CD9-208ENST00000538834 ZNF189O75820 626 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms