RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 ZMIZ1Q9ULJ6 1067 aa14.81□□□□□ -0.04
USP28-204ENST00000537642 RP1P56715 2156 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 A0A0J9YYE9 177 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 TMEM202A6NGA9 273 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 LMO7DNF2Z398 122 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 PSMD11O00231 422 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 PPP1R12AO14974 1030 aaPredicted RBP14.8□□□□□ -0.04
USP28-204ENST00000537642 RASGRP1O95267 797 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 TRBC1P01850 177 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 CELA2BP08218 269 aaPredicted RBP14.8□□□□□ -0.04
USP28-204ENST00000537642 HOXC4P09017 264 aaPredicted RBP14.8□□□□□ -0.04
USP28-204ENST00000537642 TSHRP16473 764 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 BLKP51451 505 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 SRP54P61011 504 aaKnown RBP14.8□□□□□ -0.04
USP28-204ENST00000537642 ADCY2Q08462 1091 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 ARHGEF7Q14155 803 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 HES3Q5TGS1 186 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 ZCCHC8Q6NZY4 707 aaKnown RBP14.8□□□□□ -0.04
USP28-204ENST00000537642 CRTC1Q6UUV9 634 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 Q6ZVL8 140 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 RD3Q7Z3Z2 195 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 TMEM139Q8IV31 216 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 ACRBPQ8NEB7 543 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 KRT35Q92764 455 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 PDXPQ96GD0 296 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 LGR4Q9BXB1 951 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 CEP41Q9BYV8 373 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 SAE1Q9UBE0 346 aaPredicted RBP14.8□□□□□ -0.04
USP28-204ENST00000537642 KLQ9UEF7 1012 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 DUSP10Q9Y6W6 482 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 FREM2Q5SZK8 3169 aa14.8□□□□□ -0.04
USP28-204ENST00000537642 CACNB4O00305 520 aaPredicted RBP14.79□□□□□ -0.04
USP28-204ENST00000537642 YY2O15391 372 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 CST8O60676 142 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 JUPP14923 745 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 PECAM1P16284 738 aaPredicted RBP14.79□□□□□ -0.04
USP28-204ENST00000537642 CDC25BP30305 580 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 CD86P42081 329 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 EPHB1P54762 984 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 SKOR1P84550 965 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 E2F1Q01094 437 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 INSM1Q01101 510 aaPredicted RBP14.79□□□□□ -0.04
USP28-204ENST00000537642 TFDP2Q14188 446 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 KAZNQ674X7 775 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 LRRC66Q68CR7 880 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 RFLNAQ6ZTI6 216 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 TECPR1Q7Z6L1 1165 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 DAAM2Q86T65 1068 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 NDUFAF2Q8N183 169 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 FSTL5Q8N475 847 aaPredicted RBP14.79□□□□□ -0.04
USP28-204ENST00000537642 OR56A4Q8NGH8 313 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 ATL2Q8NHH9 583 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 OR1E3Q8WZA6 343 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 BOCQ9BWV1 1114 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 LACRTQ9GZZ8 138 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 BRD8Q9H0E9 1235 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 WDR26Q9H7D7 661 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 USP29Q9HBJ7 922 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 PCDH9Q9HC56 1237 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 FGF22Q9HCT0 170 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 MRPL40Q9NQ50 206 aaKnown RBP14.79□□□□□ -0.04
USP28-204ENST00000537642 KCTD5Q9NXV2 234 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 SEPT10Q9P0V9 454 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 DGKBQ9Y6T7 804 aa14.79□□□□□ -0.04
USP28-204ENST00000537642 hCG_1818297A0A087WSY0 165 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 TRABD2BA6NFA1 517 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 CAPN8A6NHC0 703 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 BTNL10A8MVZ5 291 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 ZRANB2O95218 330 aaKnown RBP eCLIP14.78□□□□□ -0.041e-6■■■■■ 42
USP28-204ENST00000537642 IPO7O95373 1038 aaKnown RBP14.78□□□□□ -0.04
USP28-204ENST00000537642 TNFP01375 233 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 ANXA6P08133 673 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 CTSEP14091 401 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 TGM2P21980 687 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 CA4P22748 312 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 NR2C2P49116 596 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 DUSP3P51452 185 aaPredicted RBP14.78□□□□□ -0.04
USP28-204ENST00000537642 RPL26P61254 145 aaKnown RBP14.78□□□□□ -0.04
USP28-204ENST00000537642 PTSQ03393 145 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 PRKD1Q15139 912 aaPredicted RBP14.78□□□□□ -0.04
USP28-204ENST00000537642 TCEA2Q15560 299 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 CDKN3Q16667 212 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 TFDP3Q5H9I0 405 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 C6orf132Q5T0Z8 1188 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 GUSBP11Q6P575 273 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 HEATR4Q86WZ0 1026 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 SLC35F3Q8IY50 421 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 RCOR2Q8IZ40 523 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 LPCAT1Q8NF37 534 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 EXD1Q8NHP7 514 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 AGAP3Q96P47 875 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 BAG1Q99933 345 aaPredicted RBP14.78□□□□□ -0.04
USP28-204ENST00000537642 TEX101Q9BY14 249 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 ABCG8Q9H221 673 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 EVA1BQ9NVM1 165 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 RPL26L1Q9UNX3 145 aaKnown RBP14.78□□□□□ -0.04
USP28-204ENST00000537642 ARHGEF17Q96PE2 2063 aaPredicted RBP14.78□□□□□ -0.04
USP28-204ENST00000537642 DMXL2Q8TDJ6 3036 aa14.78□□□□□ -0.04
USP28-204ENST00000537642 TAF4O00268 1085 aa14.77□□□□□ -0.05
USP28-204ENST00000537642 TNFRSF10CO14798 259 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms