RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CAPN8A6NHC0 703 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 FZD6O60353 706 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 MMP20O60882 483 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 HOXC4P09017 264 aaPredicted RBP12.49□□□□□ -0.41
PRKDC-207ENST00000536483 ITIH2P19823 946 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 IGFALSP35858 605 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 MAGEA1P43355 309 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 MMP13P45452 471 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 RPIAP49247 311 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 SCNN1BP51168 640 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 SKOR1P84550 965 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 VAC14Q08AM6 782 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 LY6DQ14210 128 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 PTK2BQ14289 1009 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 MESDQ14696 234 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 C6orf132Q5T0Z8 1188 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 TIGD7Q6NT04 549 aaPredicted RBP12.49□□□□□ -0.41
PRKDC-207ENST00000536483 DPPA4Q7L190 304 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 SLC35F3Q8IY50 421 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 RAVER1Q8IY67 606 aaKnown RBP12.49□□□□□ -0.41
PRKDC-207ENST00000536483 NSMCE1Q8WV22 266 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 GLMNQ92990 594 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 GRAMD1AQ96CP6 724 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 HDAC11Q96DB2 347 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 CALR3Q96L12 384 aaKnown RBP12.49□□□□□ -0.41
PRKDC-207ENST00000536483 LRRC61Q9BV99 259 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 BOCQ9BWV1 1114 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 NOD2Q9HC29 1040 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 KCTD5Q9NXV2 234 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 PCDHGA8Q9Y5G5 932 aa12.49□□□□□ -0.41
PRKDC-207ENST00000536483 TMEM110-MUSTN1A8MSY1 372 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 LMO7DNF2Z398 122 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 J3QKU1 62 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 YY2O15391 372 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 MFSD11O43934 449 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 TCEA3O75764 348 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 ANXA6P08133 673 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 C6P13671 934 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 TSHRP16473 764 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 XPAP23025 273 aaPredicted RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 TRIM23P36406 574 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 SSR1P43307 286 aaKnown RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 SLC10A2Q12908 348 aaPredicted RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 RALGDSQ12967 914 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 ZNF235Q14590 738 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 LRRC14Q15048 493 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 WSCD2Q2TBF2 565 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 FAXCQ5TGI0 409 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 LIPIQ6XZB0 460 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 TMTC1Q8IUR5 882 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 RHOT1Q8IXI2 618 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 PLD5Q8N7P1 536 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 SNRNP27Q8WVK2 155 aaKnown RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 TTC9Q92623 222 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 MCCC1Q96RQ3 725 aaPredicted RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 CLPBQ9H078 707 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 BRD8Q9H0E9 1235 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 SYNDIG1Q9H7V2 258 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 MBNL1Q9NR56 388 aaKnown RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 DDX56Q9NY93 547 aaKnown RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 PHTF1Q9UMS5 762 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
PRKDC-207ENST00000536483 COL27A1Q8IZC6 1860 aaPredicted RBP12.48□□□□□ -0.41
PRKDC-207ENST00000536483 KIF26BQ2KJY2 2108 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 BTNL10A8MVZ5 291 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 CDRT15L2A8MXV6 281 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 TNFSF15O95150 251 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 PGLSO95336 258 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 CELA2BP08218 269 aaPredicted RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 ZFXP17010 805 aaPredicted RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 GM2AP17900 193 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 NFKBIAP25963 317 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 CYLC1P35663 651 aaPredicted RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 LIG3P49916 1009 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 PDX1P52945 283 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 PPARDQ03181 441 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 GBE1Q04446 702 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 PPIDQ08752 370 aaKnown RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 MTM1Q13496 603 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 CFAP58Q5T655 872 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 KIAA1614Q5VZ46 1190 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 ESRP1Q6NXG1 681 aaKnown RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 MACC1Q6ZN28 852 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 ARL14Q8N4G2 192 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 WDR36Q8NI36 951 aaKnown RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 NAT6Q93015 286 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 CCDC97Q96F63 343 aaPredicted RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 SCRN2Q96FV2 425 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 OLFM3Q96PB7 478 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 CCDC3Q9BQI4 270 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 WRAP53Q9BUR4 548 aaKnown RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
PRKDC-207ENST00000536483 GULP1Q9UBP9 304 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 PADI4Q9UM07 663 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 PCDHA13Q9Y5I0 950 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 ALG6Q9Y672 507 aa12.47□□□□□ -0.41
PRKDC-207ENST00000536483 EPN1Q9Y6I3 576 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms