RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 UGT1A5P35504 534 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 GNPDA1P46926 289 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 ATP1A2P50993 1020 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 MAPK10P53779 464 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 DPYSL2Q16555 572 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 CA9Q16790 459 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 SMTNL2Q2TAL5 461 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 ZDHHC1Q8WTX9 485 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 PRR11Q96HE9 360 aaPredicted RBP13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 FAM117AQ9C073 453 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 POLR1EQ9GZS1 481 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 TRNAU1APQ9NX07 287 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 CWC15Q9P013 229 aaKnown RBP13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 B4GALT6Q9UBX8 382 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 ANAPC7Q9UJX3 599 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
CLSTN3-205ENST00000535452 ARID1BQ8NFD5 2236 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 TMEM202A6NGA9 273 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 K7ENP7 123 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 LIPCP11150 499 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 CCNB1P14635 433 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 MX2P20592 715 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 SLC5A2P31639 672 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 PRKCIP41743 596 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 TNNT3P45378 269 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 SLC10A7Q0GE19 358 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 NCAPHQ15003 741 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 AMZ1Q400G9 498 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 INO80CQ6PI98 192 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 XKR5Q6UX68 686 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 ZNF571Q7Z3V5 609 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 HEATR4Q86WZ0 1026 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 PLA2G15Q8NCC3 412 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 GPR156Q8NFN8 814 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 TEKT4Q8WW24 435 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 OR1E3Q8WZA6 343 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 DPYSL5Q9BPU6 564 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 TMEM168Q9H0V1 697 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 FGF22Q9HCT0 170 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 MRPL40Q9NQ50 206 aaKnown RBP13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 RCOR3Q9P2K3 495 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 ATXN7L1Q9ULK2 861 aaPredicted RBP13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 PCDHGC4Q9Y5F7 938 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 RNF215Q9Y6U7 377 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 WDFY3Q8IZQ1 3526 aa13.25□□□□□ -0.29
CLSTN3-205ENST00000535452 J3QKU1 62 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 NVLO15381 856 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 ASMTLO95671 621 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 SERPING1P05155 500 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 TPM1P09493 284 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 SKILP12757 684 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 SLC2A4P14672 509 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 ZNF30P17039 623 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 AMPD1P23109 780 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 CSTF2P33240 577 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 TRIM23P36406 574 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 RGRP47804 291 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 RALGDSQ12967 914 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 DPYSQ14117 519 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 CAVIN1Q6NZI2 390 aaKnown RBP13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 DOK6Q6PKX4 331 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 SLC30A9Q6PML9 568 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 SPRED1Q7Z699 444 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 ARHGAP12Q8IWW6 846 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 NPWQ8N729 165 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 KCTD6Q8NC69 237 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 CCHCR1Q8TD31 782 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 AP2M1Q96CW1 435 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 MED8Q96G25 268 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 CSPG4P5Q96PW8 444 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 PEBP4Q96S96 227 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 DEF6Q9H4E7 631 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 CAAP1Q9H8G2 361 aa13.24□□□□□ -0.29
CLSTN3-205ENST00000535452 TRAFD1O14545 582 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 HGSO14964 777 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 GJC1P36383 396 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ACTR1BP42025 376 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 GPR3P46089 330 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 UBASH3AP57075 661 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ACTR1AP61163 376 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 CDK3Q00526 305 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 CLN3Q13286 438 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 LRP8Q14114 963 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 HLTFQ14527 1009 aaKnown RBP eCLIP13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 CNGA3Q16281 694 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 FIGNQ5HY92 759 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 OGFOD3Q6PK18 319 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ARHGAP36Q6ZRI8 547 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 POLNQ7Z5Q5 900 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ZSWIM9Q86XI8 627 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 GALNT13Q8IUC8 556 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 ZNF843Q8N446 348 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 AVL9Q8NBF6 648 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 SGF29Q96ES7 293 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 DTD2Q96FN9 168 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 SCRN2Q96FV2 425 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 SLC38A3Q99624 504 aa13.23□□□□□ -0.29
CLSTN3-205ENST00000535452 MGME1Q9BQP7 344 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms