RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	PPM1E	Q8WY54	764 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	FEM1C	Q96JP0	617 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	PKP4	Q99569	1192 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	SH3GL2	Q99962	352 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	HAUS8	Q9BT25	410 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	PLEKHA4	Q9H4M7	779 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	ESRP2	Q9H6T0	727 aa	Known RBP	5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	HINT3	Q9NQE9	182 aa	Known RBP	5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	SARDH	Q9UL12	918 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	AAR2	Q9Y312	384 aa	Known RBP	5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	SCIN	Q9Y6U3	715 aa		5.1	□□□□□ -1.59
PRKDC-205	ENST00000535375	MID1	O15344	667 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	HOXB5	P09067	269 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	DGKA	P23743	735 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	RRM1	P23921	792 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	CPOX	P36551	454 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	DLX5	P56178	289 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	TROAP	Q12815	778 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	NAE1	Q13564	534 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	ZRSR1	Q15695	479 aa	Known RBP	5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	C2orf68	Q2NKX9	166 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	EIF2S3L	Q2VIR3	472 aa	Known RBP	5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	GORAB	Q5T7V8	394 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	RGMB	Q6NW40	437 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	KCTD18	Q6PI47	426 aa	Predicted RBP	5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	DSTYK	Q6XUX3	929 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	GSTA5	Q7RTV2	222 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	CERS3	Q8IU89	383 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	ARMC8	Q8IUR7	673 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	SPATA6L	Q8N4H0	392 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	CADM4	Q8NFZ8	388 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	SLC25A18	Q9H1K4	315 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	POU2F3	Q9UKI9	436 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	KCNS2	Q9ULS6	477 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	CRYL1	Q9Y2S2	319 aa		5.09	□□□□□ -1.59
PRKDC-205	ENST00000535375	GOLGA6L9	A6NEM1	432 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	TAF4	O00268	1085 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	KRT86	O43790	486 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	MAOA	P21397	527 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	ABCD3	P28288	659 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	CLCNKA	P51800	687 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	EIF3B	P55884	814 aa	Known RBP	5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PTP4A2	Q12974	167 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	ZBTB17	Q13105	803 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	KRT81	Q14533	505 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PRICKLE4	Q2TBC4	344 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	IRAK1BP1	Q5VVH5	260 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	HEATR4	Q86WZ0	1026 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	ZNF441	Q8N8Z8	693 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PABPC5	Q96DU9	382 aa	Known RBP	5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	FAM110A	Q9BQ89	295 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	IFIH1	Q9BYX4	1025 aa	Known RBP	5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PAIP1	Q9H074	479 aa	Known RBP	5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	TKTL2	Q9H0I9	626 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PPP1R3E	Q9H7J1	279 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PRKRIP1	Q9H875	184 aa	Predicted RBP	5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PCDH9	Q9HC56	1237 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	MCM9	Q9NXL9	1143 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	PDP2	Q9P2J9	529 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	TINAG	Q9UJW2	476 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	GJD2	Q9UKL4	321 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	CAMK2A	Q9UQM7	478 aa		5.08	□□□□□ -1.6
PRKDC-205	ENST00000535375	EIF3CL	B5ME19	914 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	SNAP23	O00161	211 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	LINC01565	O15544	149 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	SEC31A	O94979	1220 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	F9	P00740	461 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	MCM3	P25205	808 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	BDKRB2	P30411	391 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	DDIT3	P35638	169 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	TMPO	P42166	694 aa	Known RBP	5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	TUB	P50607	506 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	DRAP1	Q14919	205 aa	Predicted RBP	5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	SYT16	Q17RD7	645 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	ZNF628	Q5EBL2	1059 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	GDPD4	Q6W3E5	623 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	C9orf139	Q6ZV77	190 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	HAPLN4	Q86UW8	402 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	WDR63	Q8IWG1	891 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	EXOC8	Q8IYI6	725 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	SLC41A2	Q96JW4	573 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	TBATA	Q96M53	351 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	GLIS2	Q9BZE0	524 aa	Predicted RBP	5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	MYH16	Q9H6N6	1097 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	EBF2	Q9HAK2	575 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	C1RL	Q9NZP8	487 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	HAO1	Q9UJM8	370 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	GTF2A1L	Q9UNN4	478 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	CEPT1	Q9Y6K0	416 aa		5.07	□□□□□ -1.6
PRKDC-205	ENST00000535375	BMPR1B	O00238	502 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	LDLRAD4	O15165	306 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	GRID2	O43424	1007 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	IGLV2-11	P01706	119 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	KCNA5	P22460	613 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	CDA	P32320	146 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	GNL1	P36915	607 aa	Predicted RBP	5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	ZNF132	P52740	706 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	PDE1B	Q01064	536 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	COL28A1	Q2UY09	1125 aa		5.06	□□□□□ -1.6
PRKDC-205	ENST00000535375	USP41	Q3LFD5	358 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms