RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 ANKRD17O75179 2603 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 H3BRJ5 948 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 GYPCP04921 128 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 SERPING1P05155 500 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 CELA2BP08218 269 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 ITGA2BP08514 1039 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 XPAP23025 273 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 SLC5A2P31639 672 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 SCNN1BP51168 640 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 BLKP51451 505 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 RENBPP51606 427 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 AP1S1P61966 158 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 BCL2L1Q07817 233 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 MTM1Q13496 603 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 C1orf61Q13536 156 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 NFATC4Q14934 902 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 NR0B2Q15466 257 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 TBR1Q16650 682 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 SKIDA1Q1XH10 827 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 ALG11Q2TAA5 492 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 PERM1Q5SV97 790 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 FAXCQ5TGI0 409 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 TMCO4Q5TGY1 634 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 KCTD16Q68DU8 428 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 LVRNQ6Q4G3 990 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 JAMLQ86YT9 394 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 FAM26EQ8N5C1 309 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 PLA2G15Q8NCC3 412 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 TPCN2Q8NHX9 752 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 TSACCQ96A04 125 aaPredicted RBP10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 FUBP1Q96AE4 644 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 IQCDQ96DY2 449 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 BTBD6Q96KE9 485 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 NUDCD1Q96RS6 583 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 IL12RB2Q99665 862 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 MGME1Q9BQP7 344 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 SLC13A1Q9BZW2 595 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 EPN3Q9H201 632 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 SYNDIG1Q9H7V2 258 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 PCDH18Q9HCL0 1135 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 PPIL1Q9Y3C6 166 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 DGKBQ9Y6T7 804 aa10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 ZFC3H1O60293 1989 aaKnown RBP10.1□□□□□ -0.79
CLSTN3-203ENST00000534830 CACNA1DQ01668 2161 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 TTC24A2A3L6 582 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 CLEC18AA5D8T8 446 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 NTN3O00634 580 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 CASC3O15234 703 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 SOCS5O75159 536 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 TCEA3O75764 348 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 RECQL5O94762 991 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 ANXA6P08133 673 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 HNRNPH3P31942 346 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 HSPA9P38646 679 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 ARL4AP40617 200 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 KIAA1024LP59773 190 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 SRP54P61011 504 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 POLR2LP62875 67 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 ELOCQ15369 112 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 TDRD12Q587J7 1177 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 RALGPS1Q5JS13 557 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 MANEAQ5SRI9 462 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 ALKBH5Q6P6C2 394 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 TMCO3Q6UWJ1 677 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 ENPP7Q6UWV6 458 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 CLEC18BQ6UXF7 455 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 PELI3Q8N2H9 469 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 FSTL5Q8N475 847 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 TEX26Q8N6G2 289 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 CLEC18CQ8NCF0 446 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 HSPH1Q92598 858 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 GLMNQ92990 594 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 COQ10AQ96MF6 247 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 RBM15Q96T37 977 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 NUP85Q9BW27 656 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 RCOR3Q9P2K3 495 aaPredicted RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 IP6K2Q9UHH9 426 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 SRPK3Q9UPE1 567 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 OR1A2Q9Y585 309 aa10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 UTP20O75691 2785 aaKnown RBP10.09□□□□□ -0.79
CLSTN3-203ENST00000534830 A0A1W2PQ67 120 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 TMEM202A6NGA9 273 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 TNFRSF10CO14798 259 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 NOBOXO60393 691 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 RASGRP1O95267 797 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 PCCBP05166 539 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 CD48P09326 243 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 ALPIP09923 528 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 ELFN1P0C7U0 828 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 HTR1BP28222 390 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 RPIAP49247 311 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 PDX1P52945 283 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 CYP4F2P78329 520 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 FOXK1P85037 733 aa10.08□□□□□ -0.8
CLSTN3-203ENST00000534830 CLCA4Q14CN2 919 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms