RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 USP39Q53GS9 565 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 CROCCP3Q8IVE0 287 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 CDK20Q8IZL9 346 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 ZCCHC7Q8N3Z6 543 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RDH11Q8TC12 318 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 ATXN2LQ8WWM7 1075 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 KCTD15Q96SI1 283 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 FGFBP2Q9BYJ0 223 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 C8orf33Q9H7E9 229 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 BCL10O95999 233 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RFX3P48380 749 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 BMPR2Q13873 1038 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 BNC2Q6ZN30 1099 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 FAM81AQ8TBF8 368 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 CLP1Q92989 425 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 KLHL5Q96PQ7 755 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RAB11FIP5Q9BXF6 653 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 MID1IP1Q9NPA3 183 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 NINJ2Q9NZG7 142 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 SH3BP4Q9P0V3 963 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 STRCQ7RTU9 1775 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RGS5O15539 181 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 TM7SF2O76062 418 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 CALCAP01258 141 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 ST13P50502 369 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 NEK3P51956 506 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 MMRN1Q13201 1228 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 MBLAC2Q68D91 279 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNF544Q6NX49 715 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 TMPRSS6Q8IU80 811 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 MTERF3Q96E29 417 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 GBA3Q9H227 469 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 ABCB8Q9NUT2 735 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 WRAP73Q9P2S5 460 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 CHKBQ9Y259 395 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 MYO1GB0I1T2 1018 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 PAPSS1O43252 624 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 ASNA1O43681 348 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 SEC22BO75396 215 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 NDUFS1P28331 727 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 HCAR3P49019 387 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 GALNT3Q14435 633 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 CCDC142Q17RM4 750 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 LDLRAP1Q5SW96 308 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 TMEM63BQ5T3F8 832 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 GRASPQ7Z6J2 395 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 CAMKK1Q8N5S9 505 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 TCF12Q99081 682 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 ZNF184Q99676 751 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 MYOCQ99972 504 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 NKX2-4Q9H2Z4 354 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 APOBEC3GQ9HC16 384 aaKnown RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 PNMA8BQ9ULN7 279 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-211ENST00000533727 NPC1O15118 1278 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 NBNO60934 754 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 CPSF4O95639 269 aaKnown RBP11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 C4BPBP20851 252 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 ATP5F1P24539 256 aaPredicted RBP11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 GSTT1P30711 240 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 GJA5P36382 358 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 NFYCQ13952 458 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 ALG11Q2TAA5 492 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 CAPN13Q6MZZ7 669 aaPredicted RBP11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 C17orf64Q86WR6 236 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 AUTS2Q8WXX7 1259 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 RNPEPL1Q9HAU8 725 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 SUSD2Q9UGT4 822 aa11.27□□□□□ -0.6
AMBRA1-211ENST00000533727 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 EPHB6O15197 1021 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 LRCH4O75427 683 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 JAM2P57087 298 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 RSBN1Q5VWQ0 802 aaPredicted RBP11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 BRAT1Q6PJG6 821 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 FAM151BQ6UXP7 276 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 ARMCX6Q7L4S7 300 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 DET1Q7L5Y6 550 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 PHF21BQ96EK2 531 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 SMOC2Q9H3U7 446 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 MYH2Q9UKX2 1941 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 YJEFN3A6XGL0 299 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 INPP4BO15327 924 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 NDUFB5O43674 189 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 ARRB1P49407 418 aaPredicted RBP11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 CXCR3P49682 368 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 PNLIPRP1P54315 467 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 TAS2R40P59535 323 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 DLG2Q15700 870 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 AP5B1Q2VPB7 878 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 ESRP1Q6NXG1 681 aaKnown RBP11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 ZBTB49Q6ZSB9 765 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 MPP5Q8N3R9 675 aa11.27□□□□□ -0.61
AMBRA1-211ENST00000533727 TTC29Q8NA56 475 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms