RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 RAD21L1Q9H4I0 556 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 DNM1LO00429 736 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 SLC25A14O95258 325 aaPredicted RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 BNIP2Q12982 314 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 TIGD5Q53EQ6 642 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 ZCCHC8Q6NZY4 707 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 CYP20A1Q6UW02 462 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 CLPTM1LQ96KA5 538 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 TXNRD2Q9NNW7 524 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 ENOPH1Q9UHY7 261 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 XRN1Q8IZH2 1706 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 ATXN2Q99700 1313 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 DHRS12A0PJE2 317 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 NPEPPSL1A6NEC2 478 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 SIN3BO75182 1162 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 SLC22A3O75751 556 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 PGM3O95394 542 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 PRKAG1P54619 331 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 GNA12Q03113 381 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 GK5Q6ZS86 529 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 NAT16Q8N8M0 369 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 RTL3Q8N8U3 475 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 CSGALNACT1Q8TDX6 532 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 ZMAT2Q96NC0 199 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 PAIP1Q9H074 479 aaKnown RBP17.57■□□□□ 0.4
PHRF1-205ENST00000533464 KCNE2Q9Y6J6 123 aa17.57■□□□□ 0.4
PHRF1-205ENST00000533464 MAPK9P45984 424 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 INTS11Q5TA45 600 aaKnown RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 SYPL2Q5VXT5 272 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 CIR1Q86X95 450 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 SCAMP5Q8TAC9 235 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 CD101Q93033 1021 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 MTERF3Q96E29 417 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 HMCESQ96FZ2 354 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 FAM192AQ9GZU8 254 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 BRD9Q9H8M2 597 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 PAIP2BQ9ULR5 123 aaKnown RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 A0A0J9YYE9 177 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 LGR5O75473 907 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 TNNI3P19429 210 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 ATP6V1C1P21283 382 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 EIF2B5Q13144 721 aaKnown RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 BRI3BPQ8WY22 251 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 PAWRQ96IZ0 340 aaKnown RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 TEKT5Q96M29 485 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 ABCG8Q9H221 673 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 CACNG4Q9UBN1 327 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 EVLQ9UI08 416 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 ENTPD4Q9Y227 616 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 PCDHGC4Q9Y5F7 938 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 PRR23D1E9PI22 279 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 ACSL4O60488 711 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 PRR23D2P0DMB1 279 aaPredicted RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 IDH2P48735 452 aaKnown RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 THOP1P52888 689 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 HNRNPDQ14103 355 aaKnown RBP17.56■□□□□ 0.4
PHRF1-205ENST00000533464 TCEA2Q15560 299 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 TTC23Q5W5X9 447 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 HPS6Q86YV9 775 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 CYP4Z2PQ8N1L4 340 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 BANPQ8N9N5 519 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 DGCR6LQ9BY27 220 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 TK2O00142 265 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 GLUD1P00367 558 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 HNF4AP41235 474 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 KIAA0408Q6ZU52 694 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 AADATQ8N5Z0 425 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 STYXQ8WUJ0 223 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 GPR21Q99679 349 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
PHRF1-205ENST00000533464 C1QTNF3-AMACRE9PGA6 284 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 MAP3K13O43283 966 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 LRATO95237 230 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 CLTBP09497 229 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 NAIF1Q69YI7 327 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-205ENST00000533464 AGAP2Q99490 1192 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 GATA5Q9BWX5 397 aaPredicted RBP17.55■□□□□ 0.4
PHRF1-205ENST00000533464 TRMT13Q9NUP7 481 aaKnown RBP17.55■□□□□ 0.4
PHRF1-205ENST00000533464 VIRMAQ69YN4 1812 aaKnown RBP17.55■□□□□ 0.4
PHRF1-205ENST00000533464 NEDD8-MDP1E9PL57 170 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 SYN3O14994 580 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 PBX3P40426 434 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 EPS8Q12929 822 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 C16orf72Q14CZ0 275 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 SLC44A4Q53GD3 710 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.55■□□□□ 0.42e-7■■■■■ 27.8
PHRF1-205ENST00000533464 PSMG2Q969U7 264 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 PANX1Q96RD7 426 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 BMP10O95393 424 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 CCL14Q16627 93 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 OR52E6Q96RD3 313 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 ARMC7Q9H6L4 198 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 TULP2O00295 520 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 CXCR2P25025 360 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 DGCR6Q14129 220 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 METTL21CQ5VZV1 264 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 ARHGAP36Q6ZRI8 547 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 CLEC20AQ6ZU45 233 aa17.55■□□□□ 0.4
PHRF1-205ENST00000533464 ZNF605Q86T29 641 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms