RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SLC9A8Q9Y2E8 581 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 CCL5P13501 91 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 ITGAXP20702 1163 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 CCR3P51677 355 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 SQLEQ14534 574 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 FAM180AQ6UWF9 173 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 SLC4A11Q8NBS3 891 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 RORBQ92753 470 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 KLHL1Q9NR64 748 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 H7C0S8 307 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 PDE9AO76083 593 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 NR2F1P10589 423 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 ADRA1BP35368 520 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 CHSY3Q70JA7 882 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 DHRSXQ8N5I4 330 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 CLEC4CQ8WTT0 213 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 AGO3Q9H9G7 860 aaKnown RBP14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 DUS2Q9NX74 493 aaKnown RBP14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 COQ6Q9Y2Z9 468 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 PDE5AO76074 875 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 C22orf31O95567 290 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 CD48P09326 243 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 ARCQ7LC44 396 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 ANKRD27Q96NW4 1050 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 WRAP53Q9BUR4 548 aaKnown RBP14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 ZFP14Q9HCL3 533 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 TSPAN19P0C672 248 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 IDSP22304 550 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 PPIBP23284 216 aaKnown RBP14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 C17orf64Q86WR6 236 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 ADGRG2Q8IZP9 1017 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 OR6Y1Q8NGX8 325 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 ZNF780BQ9Y6R6 833 aa14.8□□□□□ -0.04
PCDHA9-202ENST00000532602 LILRA4P59901 499 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 TIMM50Q3ZCQ8 353 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 FAAH2Q6GMR7 532 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ZNF549Q6P9A3 640 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 APTXQ7Z2E3 356 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 TNS4Q8IZW8 715 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 SIX5Q8N196 739 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 NELL1Q92832 810 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 REXO5Q96IC2 774 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 RAB21Q9UL25 225 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 PEX11AO75192 247 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 CDC42P60953 191 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 OLFML2BQ68BL8 750 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 GPR180Q86V85 440 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 BTBD9Q96Q07 612 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 GLOD4Q9HC38 313 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 PCDH12Q9NPG4 1184 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 C5orf60A6NFR6 353 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 GTPBP1O00178 669 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 WBP4O75554 376 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 CXCR3P49682 368 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ATXN1P54253 815 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 CAPN13Q6MZZ7 669 aaPredicted RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 RAVER1Q8IY67 606 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ZNF276Q8N554 614 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 IMP3Q9NV31 184 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 PCDHB1Q9Y5F3 818 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 H0Y858 1186 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ERAL1O75616 437 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 SERPINB7O75635 380 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 EPHX1P07099 455 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 TACR2P21452 398 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 PRKG2Q13237 762 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ANXA8L1Q5VT79 327 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 TCAIMQ8N3R3 496 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ACAT2Q9BWD1 397 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 LMAN2LQ9H0V9 348 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ERVK-5Q9HDB9 667 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 VPS4AQ9UN37 437 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 FCF1Q9Y324 198 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 TMEM191CA6NGB0 347 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 UGT2B4P06133 528 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 RHOQP17081 205 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 PTSQ03393 145 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 MTAPQ13126 283 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 GPAT3Q53EU6 434 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 TRIM40Q6P9F5 258 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 EIF3MQ7L2H7 374 aaKnown RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 LINGO1Q96FE5 620 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 CSPG4P5Q96PW8 444 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 ACE2Q9BYF1 805 aaPredicted RBP14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 MYLK2Q9H1R3 596 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 GALNT8Q9NY28 637 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 MFHAS1Q9Y4C4 1052 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 N6AMT1Q9Y5N5 214 aa14.79□□□□□ -0.04
PCDHA9-202ENST00000532602 KIF1CO43896 1103 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 OR6B1O95007 311 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 PTPN2P17706 415 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 SLC10A6Q3KNW5 377 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 RNF44Q7L0R7 432 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 APOBEC3GQ9HC16 384 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 SUCOQ9UBS9 1254 aaKnown RBP14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 NRXN3Q9Y4C0 1643 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 LRRC72A6NJI9 287 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 ZMPSTE24O75844 475 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 ARHGAP1Q07960 439 aa14.78□□□□□ -0.04
PCDHA9-202ENST00000532602 LRRC73Q5JTD7 316 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms