RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TLR6Q9Y2C9 796 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 MYADML2A6NDP7 307 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 C5orf60A6NFR6 353 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 H0Y858 1186 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 CCDC166P0CW27 439 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 WASHC2DQ5SRD0 308 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 FAAH2Q6GMR7 532 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 C16orf46Q6P387 395 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ZNF662Q6ZS27 426 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ARMCX6Q7L4S7 300 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ADAMTSL2Q86TH1 951 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ZFP28Q8NHY6 868 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 KXD1Q9BQD3 176 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 NSUN3Q9H649 340 aaKnown RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 CCDC167Q9P0B6 97 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 ENOPH1Q9UHY7 261 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 OR10H1Q9Y4A9 318 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 COL16A1Q07092 1604 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SAC3D1A6NKF1 404 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 HNRNPA1P09651 372 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 HOXB2P14652 356 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 CSKP41240 450 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 NEK3P51956 506 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 IRX1P78414 480 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 XKR6Q5GH73 641 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 FNBP1LQ5T0N5 605 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SLC30A9Q6PML9 568 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 SNX32Q86XE0 403 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 KIAA2013Q8IYS2 634 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 RTL3Q8N8U3 475 aaKnown RBP11.31□□□□□ -0.6
PTPRK-221ENST00000532331 KLK6Q92876 244 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 HMCESQ96FZ2 354 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 KCND1Q9NSA2 647 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 KCNK4Q9NYG8 393 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 WNT6Q9Y6F9 365 aa11.31□□□□□ -0.6
PTPRK-221ENST00000532331 CCNCP24863 283 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 BMPR1AP36894 532 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 C1DQ13901 141 aaKnown RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 TEX44Q53QW1 395 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CARD16Q5EG05 197 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 XKR4Q5GH76 650 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 AGMOQ6ZNB7 445 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 METTL21AQ8WXB1 218 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 BTBD1Q9H0C5 482 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ZC4H2Q9NQZ6 224 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CD84Q9UIB8 345 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 MAPRE3Q9UPY8 281 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 INSIG1O15503 277 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 LAMTOR5O43504 91 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 DCXO43602 365 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 LRIG2O94898 1065 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CCDC159P0C7I6 412 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ME2P23368 584 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ASPAP45381 313 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CXCR3P49682 368 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 TAS2R40P59535 323 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ADGRF1Q5T601 910 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 TMEM164Q5U3C3 297 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CDCA2Q69YH5 1023 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ZNF621Q6ZSS3 439 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 DPP10Q8N608 796 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 TPD52L3Q96J77 140 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 YJEFN3A6XGL0 299 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 RGS5O15539 181 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ABHD2P08910 425 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 LBPP18428 481 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ABCG1P45844 678 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 IL5RAQ01344 420 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 SAMD4BQ5PRF9 694 aaKnown RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 APLFQ8IW19 511 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 UTP15Q8TED0 518 aaKnown RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ABCG8Q9H221 673 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 MMADHCQ9H3L0 296 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 LDLRP01130 860 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 GJA5P36382 358 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 IZUMO2Q6UXV1 221 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 DNAJC14Q6Y2X3 702 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CLEC20AQ6ZU45 233 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 IRF2BP2Q7Z5L9 587 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CD248Q9HCU0 757 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 PRKAG3Q9UGI9 489 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 IL36AQ9UHA7 158 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 SERPINI2O75830 405 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 EPN2O95208 641 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ALAS2P22557 587 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ATP5F1P24539 256 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 HNRNPH3P31942 346 aaKnown RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 TCHHL1Q5QJ38 904 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 ZNF776Q68DI1 518 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 C17orf64Q86WR6 236 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 OR4K2Q8NGD2 314 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 SETD7Q8WTS6 366 aaKnown RBP11.3□□□□□ -0.6
PTPRK-221ENST00000532331 CD101Q93033 1021 aa11.3□□□□□ -0.6
PTPRK-221ENST00000532331 TMEM237Q96Q45 408 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms