RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	FAM90A24P	P0C7X0	464 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PIM1	P11309	404 aa	Predicted RBP	5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CPN2	P22792	545 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PON1	P27169	355 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PCBP3	P57721	371 aa	Known RBP	5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TAS2R40	P59535	323 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TAP1	Q03518	808 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CD69	Q07108	199 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LARS2	Q15031	903 aa	Known RBP	5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	DBN1	Q16643	649 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GSTA3	Q16772	222 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ZSCAN23	Q3MJ62	389 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	HHAT	Q5VTY9	493 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	WBP2NL	Q6ICG8	309 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LIPI	Q6XZB0	460 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SEM1	Q6ZVN7	128 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	FAM76A	Q8TAV0	307 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ARRDC3	Q96B67	414 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	RNF31	Q96EP0	1072 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	MMAB	Q96EY8	250 aa	Predicted RBP	5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	DTD2	Q96FN9	168 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SLC41A2	Q96JW4	573 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	COX4I2	Q96KJ9	171 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SH3GL3	Q99963	347 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ZNF577	Q9BSK1	485 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ZNF416	Q9BWM5	594 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PLK3	Q9H4B4	646 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SETD4	Q9NVD3	440 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	RLIM	Q9NVW2	624 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	FBXO34	Q9NWN3	711 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	5.27	□□□□□ -1.57	3e-6	■■■■□ 21.3
ECHDC1-222	ENST00000531967	TRIM10	Q9UDY6	481 aa		5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	MRPS7	Q9Y2R9	242 aa	Known RBP	5.27	□□□□□ -1.57
ECHDC1-222	ENST00000531967	NME6	O75414	186 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	MED24	O75448	989 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GNA14	O95837	355 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	DRD2	P14416	443 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GCFC2	P16383	781 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	OAZ1	P54368	228 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ATP5I	P56385	69 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GRIN1	Q05586	938 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	FOXC1	Q12948	553 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SLC39A14	Q15043	492 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PMF1	Q6P1K2	205 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SEZ6L2	Q6UXD5	910 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LRRC70	Q7Z2Q7	622 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CENPV	Q7Z7K6	275 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GAS2L3	Q86XJ1	694 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TIGD4	Q8IY51	512 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GUF1	Q8N442	669 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PIK3C3	Q8NEB9	887 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	OR2T3	Q8NH03	318 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CCDC26	Q8TAB7	109 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ZNF480	Q8WV37	535 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SELENOM	Q8WWX9	145 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CDKL2	Q92772	493 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PPP2R3C	Q969Q6	453 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	REXO5	Q96IC2	774 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	MEGF10	Q96KG7	1140 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	INPP5K	Q9BT40	448 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	NTMT1	Q9BV86	223 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SPATA5L1	Q9BVQ7	753 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	AMN	Q9BXJ7	453 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GON7	Q9BXV9	100 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	EPHX3	Q9H6B9	360 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	METTL7A	Q9H8H3	244 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SPACA1	Q9HBV2	294 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	GCM1	Q9NP62	436 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PANK4	Q9NVE7	773 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	BARHL2	Q9NY43	387 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	EHD3	Q9NZN3	535 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	HEY2	Q9UBP5	337 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	DBR1	Q9UK59	544 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PLAGL1	Q9UM63	463 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	AP4B1	Q9Y6B7	739 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PMF1-BGLAP	U3KQ54	211 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	AQR	O60306	1485 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	FYCO1	Q9BQS8	1478 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	LOC100506127	A0A0U1RQW1	187 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967		A0A1W2PN81	502 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967		M0QYG6	137 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TERT	O14746	1132 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TTI1	O43156	1089 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	KRT86	O43790	486 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SSX5	O60225	188 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	ST18	O60284	1047 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	SPDEF	O95238	335 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TRUB2	O95900	331 aa	Known RBP	5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CBX7	O95931	251 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	RLN1	P04808	185 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	YES1	P07947	543 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	RHO	P08100	348 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	NR1D1	P20393	614 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	CHRNA7	P36544	502 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	HTR2B	P41595	481 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	TBC1D25	Q3MII6	688 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967		Q3ZCU0	254 aa		5.26	□□□□□ -1.57
ECHDC1-222	ENST00000531967	USH1G	Q495M9	461 aa		5.26	□□□□□ -1.57

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