RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 INAFM1C9JVW0 142 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 I6L893 689 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 RGS14O43566 566 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 SPRY3O43610 288 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 KLK8O60259 260 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 ZNF500O60304 480 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 LCATP04180 440 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 ACAA1P09110 424 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 RFC1P35251 1148 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 RFX5P48382 616 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 PPP3CCP48454 512 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 ZXDBP98169 803 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 STK4Q13043 487 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 GPS2Q13227 327 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 RUNX2Q13950 521 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 DRAP1Q14919 205 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 HSPB2Q16082 182 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 KLHL22Q53GT1 634 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 SGO1Q5FBB7 561 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 CXorf66Q5JRM2 361 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 GKAP1Q5VSY0 366 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 TMEM71Q6P5X7 295 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 PDXDC1Q6P996 788 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 GLDNQ6ZMI3 551 aaPredicted RBP4.71□□□□□ -1.66
C11orf88-204ENST00000529661 TDRPQ86YL5 185 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 TAGAPQ8N103 731 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 TEX45Q8NA69 505 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 GJC3Q8NFK1 279 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 CEP76Q8TAP6 659 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 NEUROG1Q92886 237 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 APOLD1Q96LR9 279 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 C1orf74Q96LT6 269 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 TMEM68Q96MH6 324 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 BBS4Q96RK4 519 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 MXRA8Q9BRK3 442 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 MXD3Q9BW11 206 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 KRTAP1-5Q9BYS1 174 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 NUF2Q9BZD4 464 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 DCLK3Q9C098 648 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 ANKRD10Q9NXR5 420 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 RPS6KA6Q9UK32 745 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 A3GALT2U3KPV4 340 aa4.71□□□□□ -1.66
C11orf88-204ENST00000529661 TTC3P53804 2025 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 CDRT15L2A8MXV6 281 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 TCERG1O14776 1098 aaKnown RBP4.7□□□□□ -1.66
C11orf88-204ENST00000529661 P4HA2O15460 535 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 MMP3P08254 477 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 CBSLP0DN79 551 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 PLA2G2AP14555 144 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 MCM3P25205 808 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 HOXA13P31271 388 aaPredicted RBP4.7□□□□□ -1.66
C11orf88-204ENST00000529661 CBSP35520 551 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 KRT20P35900 424 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 PCYT1AP49585 367 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 CLCN5P51795 746 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 PMS2P54278 862 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 ZP1P60852 638 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 LPIN1Q14693 890 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 DUSP6Q16828 381 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 KRT24Q2M2I5 525 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 SOWAHAQ2M3V2 549 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 COL28A1Q2UY09 1125 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 SOWAHCQ53LP3 525 aaPredicted RBP4.7□□□□□ -1.66
C11orf88-204ENST00000529661 DNTTIP2Q5QJE6 756 aaKnown RBP4.7□□□□□ -1.66
C11orf88-204ENST00000529661 PRAMEF19Q5SWL8 479 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 FNBP1LQ5T0N5 605 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 HEPHL1Q6MZM0 1159 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 Q6ZSV7 163 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 NOXA1Q86UR1 476 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 LURAP1LQ8IV03 231 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 DENND6AQ8IWF6 608 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 C17orf53Q8N3J3 647 aaPredicted RBP4.7□□□□□ -1.66
C11orf88-204ENST00000529661 ZCCHC9Q8N567 271 aaKnown RBP4.7□□□□□ -1.66
C11orf88-204ENST00000529661 IQCF1Q8N6M8 205 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 SLITRK1Q96PX8 696 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 TKTL2Q9H0I9 626 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 KLHL31Q9H511 634 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 MAGEE1Q9HCI5 957 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 RRP7BPQ9NSQ0 103 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 WWOXQ9NZC7 414 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 AAR2Q9Y312 384 aaKnown RBP4.7□□□□□ -1.66
C11orf88-204ENST00000529661 NFE2L3Q9Y4A8 694 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 CEPT1Q9Y6K0 416 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 SESN1Q9Y6P5 492 aa4.7□□□□□ -1.66
C11orf88-204ENST00000529661 MS4A18H0YCH9 400 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 HCRTR2O43614 444 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 SLC28A2O43868 658 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 CLTBP09497 229 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 ETFAP13804 333 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 SELLP14151 372 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 GABRB1P18505 474 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 IL11P20809 199 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 TNFRSF8P28908 595 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 GCH1P30793 250 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 F2RL1P55085 397 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 FAM27E3Q08E93 113 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 CAPSQ13938 189 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 TCTN1Q2MV58 587 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 ESCO2Q56NI9 601 aa4.69□□□□□ -1.66
C11orf88-204ENST00000529661 PMS2CLQ68D20 193 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms