RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.97
VPS11-203ENST00000529545 PLAAQ9Y263 795 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 B3GALT1Q9Y5Z6 326 aa9.02□□□□□ -0.97
VPS11-203ENST00000529545 FAM170AA1A519 330 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 PRSS38A1L453 326 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 ENO4A6NNW6 628 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 B4E171 279 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 RASA4BC9J798 803 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 FAM72CH0Y354 149 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 INSIG1O15503 277 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 NKX2-8O15522 239 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 RASA4O43374 803 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 ECEL1O95672 775 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 ELFN1P0C7U0 828 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 PNMA6AP0CW24 399 aaPredicted RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 BMP6P22004 513 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 CD1CP29017 333 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 EPHB2P29323 1055 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 SERPINA4P29622 427 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 TSPAN7P41732 249 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 MTIF2P46199 727 aaKnown RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 COPB1P53618 953 aaKnown RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 CDC20Q12834 499 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 RAPGEF1Q13905 1077 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 NR1D2Q14995 579 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 ACOX1Q15067 660 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 DEFB109BQ30KR1 87 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 PARP15Q460N3 678 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 FAM72AQ5TYM5 149 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 KCTD16Q68DU8 428 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 FAM72DQ6L9T8 149 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 TRNP1Q6NT89 227 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 STRADAQ7RTN6 431 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 KDELC2Q7Z4H8 507 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 FAM72BQ86X60 149 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 NLGN4XQ8N0W4 816 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 RTL3Q8N8U3 475 aaKnown RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 TEX19Q8NA77 164 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 NLGN4YQ8NFZ3 816 aaPredicted RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 RXFP2Q8WXD0 754 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 CPA5Q8WXQ8 436 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 ABHD17AQ96GS6 310 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 AHCYL2Q96HN2 611 aaKnown RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 TUBGCP5Q96RT8 1024 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 TRIT1Q9H3H1 467 aaKnown RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 ATP13A3Q9H7F0 1226 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 CATSPERBQ9H7T0 1116 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 CARS2Q9HA77 564 aaKnown RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 PHPT1Q9NRX4 125 aaPredicted RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 TRNAU1APQ9NX07 287 aaKnown RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 KCTD5Q9NXV2 234 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 DONSONQ9NYP3 566 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 TAAR2Q9P1P5 351 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 LHX3Q9UBR4 397 aa9.01□□□□□ -0.97
VPS11-203ENST00000529545 UBA2Q9UBT2 640 aaPredicted RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 USP9YO00507 2555 aaPredicted RBP9.01□□□□□ -0.97
VPS11-203ENST00000529545 ARHGEF17Q96PE2 2063 aaPredicted RBP9□□□□□ -0.97
VPS11-203ENST00000529545 PRR19A6NJB7 356 aa9□□□□□ -0.97
VPS11-203ENST00000529545 EFCAB7A8K855 629 aa9□□□□□ -0.97
VPS11-203ENST00000529545 AGFG2O95081 481 aa9□□□□□ -0.97
VPS11-203ENST00000529545 FGF1P05230 155 aa9□□□□□ -0.97
VPS11-203ENST00000529545 THRAP10827 490 aa9□□□□□ -0.97
VPS11-203ENST00000529545 MYCLP1P12525 358 aaPredicted RBP9□□□□□ -0.97
VPS11-203ENST00000529545 TCN2P20062 427 aa9□□□□□ -0.97
VPS11-203ENST00000529545 MPSTP25325 297 aa9□□□□□ -0.97
VPS11-203ENST00000529545 TRIM23P36406 574 aa9□□□□□ -0.97
VPS11-203ENST00000529545 PTPN9P43378 593 aa9□□□□□ -0.97
VPS11-203ENST00000529545 ARSDP51689 593 aa9□□□□□ -0.97
VPS11-203ENST00000529545 BCL2L1Q07817 233 aa9□□□□□ -0.97
VPS11-203ENST00000529545 SQSTM1Q13501 440 aa9□□□□□ -0.97
VPS11-203ENST00000529545 CYTH1Q15438 398 aa9□□□□□ -0.97
VPS11-203ENST00000529545 C15orf59Q2T9L4 293 aaPredicted RBP9□□□□□ -0.97
VPS11-203ENST00000529545 CCDC14Q49A88 953 aa9□□□□□ -0.97
VPS11-203ENST00000529545 NKAIN2Q5VXU1 208 aa9□□□□□ -0.97
VPS11-203ENST00000529545 NAA35Q5VZE5 725 aa9□□□□□ -0.97
VPS11-203ENST00000529545 PNCKQ6P2M8 343 aa9□□□□□ -0.97
VPS11-203ENST00000529545 C16orf46Q6P387 395 aa9□□□□□ -0.97
VPS11-203ENST00000529545 SLC30A9Q6PML9 568 aa9□□□□□ -0.97
VPS11-203ENST00000529545 CEACAM20Q6UY09 585 aa9□□□□□ -0.97
VPS11-203ENST00000529545 LIPIQ6XZB0 460 aa9□□□□□ -0.97
VPS11-203ENST00000529545 SLFN11Q7Z7L1 901 aa9□□□□□ -0.97
VPS11-203ENST00000529545 PHLDB2Q86SQ0 1253 aa9□□□□□ -0.97
VPS11-203ENST00000529545 C17orf82Q86X59 251 aaPredicted RBP9□□□□□ -0.97
VPS11-203ENST00000529545 CAMK1DQ8IU85 385 aa9□□□□□ -0.97
VPS11-203ENST00000529545 CYP4X1Q8N118 509 aa9□□□□□ -0.97
VPS11-203ENST00000529545 CCDC185Q8N715 623 aa9□□□□□ -0.97
VPS11-203ENST00000529545 PMEPA1Q969W9 287 aa9□□□□□ -0.97
VPS11-203ENST00000529545 NTAN1Q96AB6 310 aa9□□□□□ -0.97
VPS11-203ENST00000529545 MIB2Q96AX9 1013 aa9□□□□□ -0.97
VPS11-203ENST00000529545 ZPBPQ9BS86 351 aa9□□□□□ -0.97
VPS11-203ENST00000529545 SIX2Q9NPC8 291 aa9□□□□□ -0.97
VPS11-203ENST00000529545 KCNK4Q9NYG8 393 aa9□□□□□ -0.97
VPS11-203ENST00000529545 RWDD2AQ9UIY3 292 aa9□□□□□ -0.97
VPS11-203ENST00000529545 AJAP1Q9UKB5 411 aaPredicted RBP9□□□□□ -0.97
VPS11-203ENST00000529545 PILRAQ9UKJ1 303 aa9□□□□□ -0.97
VPS11-203ENST00000529545 NBASA2RRP1 2371 aa9□□□□□ -0.97
VPS11-203ENST00000529545 SPTAN1Q13813 2472 aaKnown RBP8.99□□□□□ -0.97
VPS11-203ENST00000529545 MYO9AB2RTY4 2548 aa8.99□□□□□ -0.97
VPS11-203ENST00000529545 IGHV1OR21-1A0A087WYE8 117 aa8.99□□□□□ -0.97
VPS11-203ENST00000529545 MKRN2OSH3BPM6 223 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms