RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 TPMTP51580 245 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 ARSDP51689 593 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 ARPC4P59998 168 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 TUBA1BP68363 451 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 INSM1Q01101 510 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CLCQ05315 142 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 IL10RBQ08334 325 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC10A2Q12908 348 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 MAP7Q14244 749 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CYTH1Q15438 398 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CST6Q15828 149 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 PLK5Q496M5 336 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 ZNF776Q68DI1 518 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 NCBP2-AS2Q69YL0 99 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC9A4Q6AI14 798 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CAPRIN2Q6IMN6 1127 aaKnown RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 C22orf39Q6P5X5 142 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 MFSD7Q6UXD7 560 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 KIAA1324Q6UXG2 1013 aaKnown RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 DPY19L3Q6ZPD9 716 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 ARHGAP36Q6ZRI8 547 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 Q6ZVU0 165 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 USP30Q70CQ3 517 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 TUBA1AQ71U36 451 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CEP68Q76N32 757 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 NT5DC3Q86UY8 548 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 KBTBD6Q86V97 674 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 NLRP8Q86W28 1048 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 MMAAQ8IVH4 418 aaKnown RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 KATNAL2Q8IYT4 538 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SYCE1Q8N0S2 351 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 LINC00469Q8N7U9 141 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 TMIEQ8NEW7 156 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 EXD1Q8NHP7 514 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 OR8D1Q8WZ84 308 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 KRT35Q92764 455 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 NKD2Q969F2 451 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 PMEPA1Q969W9 287 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 VOPP1Q96AW1 172 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CCDC114Q96M63 670 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CLUHP3Q96NS8 147 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 DUSP15Q9H1R2 295 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 RABEP2Q9H5N1 569 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CD93Q9NPY3 652 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 PIH1D1Q9NWS0 290 aaKnown RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 IPO11Q9UI26 975 aaKnown RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 MBD1Q9UIS9 605 aaPredicted RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 AMFRQ9UKV5 643 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SARDHQ9UL12 918 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 GUCA1BQ9UMX6 200 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 CYP8B1Q9UNU6 501 aa6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 FCF1Q9Y324 198 aaKnown RBP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.34□□□□□ -1.4
ATPAF1-209ENST00000529214 MYO15AQ9UKN7 3530 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 USP34Q70CQ2 3546 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TRIM64A6NGJ6 449 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TRIM64BA6NI03 449 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 UPK3BL1B0FP48 263 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 UPK3BL2E5RIL1 263 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 RNF103O00237 685 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 MID1O15344 667 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 BNIP3LO60238 219 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 WFS1O76024 890 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 RHOBTB1O94844 696 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TMCC1O94876 653 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 POP4O95707 220 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PEX11BO96011 259 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 GSRP00390 522 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 IL1BP01584 269 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PRNPP04156 253 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 KRT1P04264 644 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PGRP06401 933 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CTSLP07711 333 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 ZFXP17010 805 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 C5AR1P21730 350 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 BCKDHBP21953 392 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CTNNA2P26232 953 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CD6P30203 668 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CTNNA1P35221 906 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 SKIV2L2P42285 1042 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CDKN2BP42772 138 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 RECQLP46063 649 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 MARCKSL1P49006 195 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 CENPAP49450 140 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 DNA2P51530 1060 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TPD52P55327 224 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 SNRPD1P62314 119 aaKnown RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC10A7Q0GE19 358 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 GALNT2Q10471 571 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 RFTN1Q14699 578 aaPredicted RBP6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 MYLK3Q32MK0 819 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 MINDY4Q4G0A6 757 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 ODF2Q5BJF6 829 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 TFDP3Q5H9I0 405 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 FAM46CQ5VWP2 391 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 SLC36A4Q6YBV0 504 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 SPOCD1Q6ZMY3 1216 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
ATPAF1-209ENST00000529214 REC114Q7Z4M0 266 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms