RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 FBXL14Q8N1E6 418 aa6□□□□□ -1.45
PCF11-202ENST00000528336 C11orf65Q8NCR3 313 aa6□□□□□ -1.45
PCF11-202ENST00000528336 GJC3Q8NFK1 279 aa6□□□□□ -1.45
PCF11-202ENST00000528336 TBC1D31Q96DN5 1066 aa6□□□□□ -1.45
PCF11-202ENST00000528336 KLHL15Q96M94 604 aa6□□□□□ -1.45
PCF11-202ENST00000528336 NTPCRQ9BSD7 190 aaKnown RBP6□□□□□ -1.45
PCF11-202ENST00000528336 SLC25A18Q9H1K4 315 aa6□□□□□ -1.45
PCF11-202ENST00000528336 C20orf141Q9NUB4 165 aa6□□□□□ -1.45
PCF11-202ENST00000528336 ANKRD10Q9NXR5 420 aa6□□□□□ -1.45
PCF11-202ENST00000528336 IL36RNQ9UBH0 155 aa6□□□□□ -1.45
PCF11-202ENST00000528336 PCDHA7Q9UN72 937 aa6□□□□□ -1.45
PCF11-202ENST00000528336 CAMK2AQ9UQM7 478 aa6□□□□□ -1.45
PCF11-202ENST00000528336 DENND4BO75064 1496 aaPredicted RBP6□□□□□ -1.45
PCF11-202ENST00000528336 ABCC1P33527 1531 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 SAMD9LQ8IVG5 1584 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 FSD2A1L4K1 749 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 TRIM64CA6NLI5 447 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 HSPB2A8KAH6 182 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 NUDT6P53370 316 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 KRTAP10-11P60412 298 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 Q0VFX4 171 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 HNRNPA0Q13151 305 aaKnown RBP5.99□□□□□ -1.45
PCF11-202ENST00000528336 CTTNQ14247 550 aaKnown RBP5.99□□□□□ -1.45
PCF11-202ENST00000528336 SMC1AQ14683 1233 aaKnown RBP5.99□□□□□ -1.45
PCF11-202ENST00000528336 PLCB4Q15147 1175 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 HSPB2Q16082 182 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 TTC31Q49AM3 519 aaPredicted RBP5.99□□□□□ -1.45
PCF11-202ENST00000528336 CCDC30Q5VVM6 783 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 ACAD10Q6JQN1 1059 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 TMCO3Q6UWJ1 677 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 ENOSF1Q7L5Y1 443 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 ZDHHC17Q8IUH5 632 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 B4GALNT2Q8NHY0 566 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 ADAMTS14Q8WXS8 1223 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 CCDC34Q96HJ3 373 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 SIN3AQ96ST3 1273 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 AGXT2Q9BYV1 514 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 TSPY26PQ9H489 355 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 MRGBPQ9NV56 204 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 TMEM51Q9NW97 253 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 CARD8Q9Y2G2 431 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.99□□□□□ -1.45
PCF11-202ENST00000528336 ARHGEF12Q9NZN5 1544 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 FGD6Q6ZV73 1430 aa5.99□□□□□ -1.45
PCF11-202ENST00000528336 ZNF644Q9H582 1327 aaPredicted RBP5.99□□□□□ -1.45
PCF11-202ENST00000528336 CAMSAP2Q08AD1 1489 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 ZNF518AQ6AHZ1 1483 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 MBD5Q9P267 1494 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 IFNL4K9M1U5 179 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 HTATSF1O43719 755 aaKnown RBP5.98□□□□□ -1.45
PCF11-202ENST00000528336 AHCYL1O43865 530 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 DNTTP04053 509 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 PCNAP12004 261 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 EFNA5P52803 228 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 ITGADQ13349 1161 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 PPP2R5BQ15173 497 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 PKN2Q16513 984 aaKnown RBP5.98□□□□□ -1.45
PCF11-202ENST00000528336 ESCO2Q56NI9 601 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 KRT74Q7RTS7 529 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 ERC1Q8IUD2 1116 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 PARP16Q8N5Y8 322 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 ARL10Q8N8L6 244 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 OR8H1Q8NGG4 311 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 OR14A16Q8NHC5 309 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 MIB2Q96AX9 1013 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 BBS4Q96RK4 519 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 CLK4Q9HAZ1 481 aaKnown RBP5.98□□□□□ -1.45
PCF11-202ENST00000528336 PREBQ9HCU5 417 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 KCND2Q9NZV8 630 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 SARDHQ9UL12 918 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 PA2G4Q9UQ80 394 aaKnown RBP5.98□□□□□ -1.45
PCF11-202ENST00000528336 NAALADL1Q9UQQ1 740 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 SYCP2Q9BX26 1530 aa5.98□□□□□ -1.45
PCF11-202ENST00000528336 FRMPD1Q5SYB0 1578 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 TCOF1Q13428 1488 aaKnown RBP5.97□□□□□ -1.45
PCF11-202ENST00000528336 MAGI2Q86UL8 1455 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 TRIM64A6NGJ6 449 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 TRIM64BA6NI03 449 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 ZBED4O75132 1171 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 F9P00740 461 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 HEXAP06865 529 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 ACAA1P09110 424 aaPredicted RBP5.97□□□□□ -1.45
PCF11-202ENST00000528336 HOXC6P09630 235 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 AKR1B1P15121 316 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 MYF6P23409 242 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 NANOS2P60321 138 aaKnown RBP5.97□□□□□ -1.45
PCF11-202ENST00000528336 CRYZQ08257 329 aaKnown RBP5.97□□□□□ -1.45
PCF11-202ENST00000528336 SOWAHAQ2M3V2 549 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 PRICKLE4Q2TBC4 344 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 DCAF6Q58WW2 860 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 TYW3Q6IPR3 259 aaKnown RBP5.97□□□□□ -1.45
PCF11-202ENST00000528336 CPLX2Q6PUV4 134 aaKnown RBP5.97□□□□□ -1.45
PCF11-202ENST00000528336 H1FNTQ75WM6 255 aaPredicted RBP5.97□□□□□ -1.45
PCF11-202ENST00000528336 TDRPQ86YL5 185 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 ARMC8Q8IUR7 673 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 CCDC105Q8IYK2 499 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 AFAP1Q8N556 730 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 TSPYL6Q8N831 410 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 C9orf106Q8NAJ2 232 aa5.97□□□□□ -1.45
PCF11-202ENST00000528336 BAG1Q99933 345 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms