RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 KLHL4Q9C0H6 718 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 NACA2Q9H009 215 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 SUDS3Q9H7L9 328 aaPredicted RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 MRPL40Q9NQ50 206 aaKnown RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 MTRRQ9UBK8 725 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 TRAF6Q9Y4K3 522 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 MICAL3Q7RTP6 2002 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 TCAF2A6NFQ2 919 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 NT5C1B-RDH14C9J2C7 533 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 SKAP2O75563 359 aaPredicted RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 GJB3O75712 270 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 CD1EP15812 388 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 RAG1P15918 1043 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 ZNF37AP17032 561 aaPredicted RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 RPL26P61254 145 aaKnown RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 HECTD3Q5T447 861 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 PRSS55Q6UWB4 352 aaPredicted RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 PDSS2Q86YH6 399 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 TMEM126BQ8IUX1 230 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 OR13C4Q8NGS5 318 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 TCF12Q99081 682 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 AARSD1Q9BTE6 412 aaKnown RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 MRPL1Q9BYD6 325 aaKnown RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 TFB2MQ9H5Q4 396 aaKnown RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 HACD3Q9P035 362 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 C6orf203Q9P0P8 240 aaPredicted RBP15.36■□□□□ 0.05
USH1C-207ENST00000527720 HSFX1Q9UBD0 423 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 ADAMTS6Q9UKP5 1117 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 PSMD13Q9UNM6 376 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 BACE2Q9Y5Z0 518 aa15.36■□□□□ 0.05
USH1C-207ENST00000527720 HTTP42858 3142 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 ZNF840PA6NDX5 716 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 TBKBP1A7MCY6 615 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 H3BNX3 289 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 UBDO15205 165 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 INSIG1O15503 277 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 KIF1CO43896 1103 aaKnown RBP15.35■□□□□ 0.05
USH1C-207ENST00000527720 AOC2O75106 756 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 EFEMP2O95967 443 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 CR2P20023 1033 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 ME2P23368 584 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 PMLP29590 882 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 ATP4BP51164 291 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 ZNF140P52738 457 aaPredicted RBP15.35■□□□□ 0.05
USH1C-207ENST00000527720 PLK1P53350 603 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 TIAL1Q01085 375 aaKnown RBP eCLIP15.35■□□□□ 0.05
USH1C-207ENST00000527720 TAF1AQ15573 450 aaPredicted RBP15.35■□□□□ 0.05
USH1C-207ENST00000527720 AFTPHQ6ULP2 937 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 TAS1R1Q7RTX1 841 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 RAB44Q7Z6P3 723 aaPredicted RBP15.35■□□□□ 0.05
USH1C-207ENST00000527720 PIM3Q86V86 326 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 SLAIN1Q8ND83 568 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 OR7D4Q8NG98 312 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 DLG3Q92796 817 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 PTERQ96BW5 349 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 ZNF512Q96ME7 567 aaPredicted RBP15.35■□□□□ 0.05
USH1C-207ENST00000527720 CWH43Q9H720 699 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 SYTL2Q9HCH5 934 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 POLR3BQ9NW08 1133 aaPredicted RBP15.35■□□□□ 0.05
USH1C-207ENST00000527720 HCSTQ9UBK5 93 aa15.35■□□□□ 0.05
USH1C-207ENST00000527720 TRPA1O75762 1119 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 SUPT7LO94864 414 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 ENO3P13929 434 aaPredicted RBP15.34■□□□□ 0.05
USH1C-207ENST00000527720 KCNC1P48547 511 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 PSMD8P48556 350 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 THOP1P52888 689 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 C1QTNF8P60827 252 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 PTK2BQ14289 1009 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 SEMA3AQ14563 771 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 USP41Q3LFD5 358 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 UNC50Q53HI1 259 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 TMEM173Q86WV6 379 aaPredicted RBP15.34■□□□□ 0.05
USH1C-207ENST00000527720 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 UCMAQ8WVF2 138 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 MARK4Q96L34 752 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 GPC4O75487 556 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 SLC4A1P02730 911 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 FGF4P08620 206 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 NAA20P61599 178 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 PDAP1Q13442 181 aaKnown RBP15.34■□□□□ 0.05
USH1C-207ENST00000527720 FLOT2Q14254 428 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 CLYBLQ8N0X4 340 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 PNPLA1Q8N8W4 532 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 GDPD5Q8WTR4 605 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 BCL7CQ8WUZ0 217 aaPredicted RBP15.34■□□□□ 0.05
USH1C-207ENST00000527720 TNFRSF12AQ9NP84 129 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 VPS9D1Q9Y2B5 631 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 FIS1Q9Y3D6 152 aa15.34■□□□□ 0.05
USH1C-207ENST00000527720 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.33■□□□□ 0.05
USH1C-207ENST00000527720 A0A1B0GVM2 712 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 DPPA5A6NC42 116 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 C2orf81A6NN90 581 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 PSMD12O00232 456 aaPredicted RBP15.33■□□□□ 0.05
USH1C-207ENST00000527720 GJB5O95377 273 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 RHOCP08134 193 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 ZNF177Q13360 481 aaPredicted RBP15.33■□□□□ 0.05
USH1C-207ENST00000527720 CEACAM7Q14002 265 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 DENND1CQ8IV53 801 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 MFN1Q8IWA4 741 aa15.33■□□□□ 0.05
USH1C-207ENST00000527720 HIPK4Q8NE63 616 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms