RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 MAML1Q92585 1016 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 DCBLD2Q96PD2 775 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 MCCC1Q96RQ3 725 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-207ENST00000527189 POLR1EQ9GZS1 481 aaKnown RBP13.42□□□□□ -0.26
CAPN1-207ENST00000527189 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 WDR26Q9H7D7 661 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 GPR34Q9UPC5 381 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 ANKRD36A6QL64 1941 aa13.42□□□□□ -0.26
CAPN1-207ENST00000527189 TTC24A2A3L6 582 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-207ENST00000527189 TMEM202A6NGA9 273 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 A8MX80 341 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 ZNF487B1APH4 448 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 TMX2-CTNND1H3BSU7 103 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 NTN3O00634 580 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-207ENST00000527189 MPOP05164 745 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 CD48P09326 243 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 TPM1P09493 284 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 TMEM253P0C7T8 217 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 PNLIPP16233 465 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 MX2P20592 715 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-207ENST00000527189 MAXP61244 160 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 GABREP78334 506 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 TRAF2Q12933 501 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 MMRN1Q13201 1228 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 ARHGEF7Q14155 803 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 CNGA3Q16281 694 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 ATP13A4Q4VNC1 1196 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 NCBP2-AS2Q69YL0 99 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 NLRP8Q86W28 1048 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 VSIG1Q86XK7 387 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 ZNF248Q8NDW4 579 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 GPR156Q8NFN8 814 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 PCDH19Q8TAB3 1148 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 PIH1D2Q8WWB5 315 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 FAF2Q96CS3 445 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 NUS1Q96E22 293 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 CCDC3Q9BQI4 270 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 TEX101Q9BY14 249 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 NT5MQ9NPB1 228 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 PHPT1Q9NRX4 125 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-207ENST00000527189 GULP1Q9UBP9 304 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 DNPEPQ9ULA0 475 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 PCDHGA8Q9Y5G5 932 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 ENTPD2Q9Y5L3 495 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 RAI2Q9Y5P3 530 aa13.41□□□□□ -0.26
CAPN1-207ENST00000527189 ATMQ13315 3056 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 FZD6O60353 706 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 CELA2BP08218 269 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-207ENST00000527189 MYCLP1P12525 358 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-207ENST00000527189 ZNF30P17039 623 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 CA4P22748 312 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 ARHGAP25P42331 645 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 PCBP4P57723 403 aaKnown RBP13.4□□□□□ -0.26
CAPN1-207ENST00000527189 DPTQ07507 201 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 ITKQ08881 620 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 PEX6Q13608 980 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 SPIDRQ14159 915 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 TAF8Q7Z7C8 310 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 OR1E3Q8WZA6 343 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 DTD2Q96FN9 168 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 PDXPQ96GD0 296 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 HIC2Q96JB3 615 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 SLC46A1Q96NT5 459 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 SEMA3CQ99985 751 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 LGR4Q9BXB1 951 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 FGF22Q9HCT0 170 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 THSD1Q9NS62 852 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 APPL1Q9UKG1 709 aa13.4□□□□□ -0.26
CAPN1-207ENST00000527189 NPIPB15A6NHN6 443 aaPredicted RBP13.39□□□□□ -0.27
CAPN1-207ENST00000527189 MFSD11O43934 449 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 AKR1B10O60218 316 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 PYGLP06737 847 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 CCNB1P14635 433 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 GLB1P16278 677 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 LHCGRP22888 699 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 ITPKBP27987 946 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 RBMS1P29558 406 aaKnown RBP13.39□□□□□ -0.27
CAPN1-207ENST00000527189 TAS2R40P59535 323 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 RPL26P61254 145 aaKnown RBP13.39□□□□□ -0.27
CAPN1-207ENST00000527189 TECPR1Q7Z6L1 1165 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 VSTM4Q8IW00 320 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 RHOT2Q8IXI1 618 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 KYQ8NBH2 561 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 FAM46DQ8NEK8 389 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
CAPN1-207ENST00000527189 GPBAR1Q8TDU6 330 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 HDAC11Q96DB2 347 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 CCDC42Q96M95 316 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 PACSIN1Q9BY11 444 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 DPH1Q9BZG8 443 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 PRORYQ9H606 182 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 CYP4F12Q9HCS2 524 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 ASCL3Q9NQ33 180 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 ABHD10Q9NUJ1 306 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 RBM22Q9NW64 420 aaKnown RBP eCLIP13.39□□□□□ -0.27
CAPN1-207ENST00000527189 TRNAU1APQ9NX07 287 aaKnown RBP13.39□□□□□ -0.27
CAPN1-207ENST00000527189 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
CAPN1-207ENST00000527189 RPL26L1Q9UNX3 145 aaKnown RBP13.39□□□□□ -0.27
CAPN1-207ENST00000527189 RP1P56715 2156 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms