RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 ITKQ08881 620 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 SIRPB2Q5JXA9 342 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 IRAK1BP1Q5VVH5 260 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 DHFR2Q86XF0 187 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 MYO1HQ8N1T3 1032 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 UMODL1-AS1Q8N2C9 162 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 TSPAN14Q8NG11 270 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 OR6P1Q8NGX9 317 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 GABPB2Q8TAK5 448 aaPredicted RBP11.68□□□□□ -0.54
LINC01001-201ENST00000526704 EXT2Q93063 718 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 LRCH3Q96II8 777 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 ERVK-6Q9BXR3 956 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 NOL11Q9H8H0 719 aaKnown RBP11.68□□□□□ -0.54
LINC01001-201ENST00000526704 AKTIPQ9H8T0 292 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
LINC01001-201ENST00000526704 PRDM5Q9NQX1 630 aaPredicted RBP11.68□□□□□ -0.54
LINC01001-201ENST00000526704 VPS45Q9NRW7 570 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 RGS18Q9NS28 235 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 HACD3Q9P035 362 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 GIMAP2Q9UG22 337 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 DSEQ9UL01 958 aa11.68□□□□□ -0.54
LINC01001-201ENST00000526704 FRMPD3Q5JV73 1810 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 PLOD2O00469 737 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 NME4O00746 187 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 HTRA2O43464 458 aaPredicted RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 TIPRLO75663 272 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 TMCC1O94876 653 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ATXN1LP0C7T5 689 aaKnown RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 CD1DP15813 335 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 FDXRP22570 491 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 SLC5A2P31639 672 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 GRIK1P39086 918 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 RENBPP51606 427 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 TIAL1Q01085 375 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 TSPY1Q01534 308 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 MAPRE1Q15691 268 aaKnown RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ADRM1Q16186 407 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 TMEM259Q4ZIN3 620 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 GDF6Q6KF10 455 aaPredicted RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ZNF549Q6P9A3 640 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 SPATA2LQ8IUW3 424 aaPredicted RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ALDH16A1Q8IZ83 802 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 NUP93Q8N1F7 819 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 OR2T34Q8NGX1 318 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 OR2T3Q8NH03 318 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 FATE1Q969F0 183 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ROPN1LQ96C74 230 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 PABPC5Q96DU9 382 aaKnown RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 SERPINB11Q96P15 392 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 GPATCH1Q9BRR8 931 aaKnown RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 TMEM79Q9BSE2 394 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 DDX18Q9NVP1 670 aaKnown RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 DUS2Q9NX74 493 aaKnown RBP11.67□□□□□ -0.54
LINC01001-201ENST00000526704 LMCD1Q9NZU5 365 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 HSFX1Q9UBD0 423 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 Q9Y3F1 56 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 VWA8A3KMH1 1905 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 H3BSA7 217 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 NR5A2O00482 541 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 SOCS2O14508 198 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 LDB2O43679 373 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 CNTN5O94779 1100 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 SLC4A1P02730 911 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ZNF23P17027 643 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 GRIA3P42263 894 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 NDST2P52849 883 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 CDH13P55290 713 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 NME5P56597 212 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 STX1BP61266 288 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 SH3BP2P78314 561 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 MGAT3Q09327 533 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ALFQ53S48 1182 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 PGBD5Q8N414 524 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ANKFN1Q8N957 763 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 OR52K2Q8NGK3 314 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 GRIN3AQ8TCU5 1115 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 CANT1Q8WVQ1 401 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 TADA1Q96BN2 335 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 SLC39A13Q96H72 371 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 C1orf74Q96LT6 269 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 ABCD2Q9UBJ2 740 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 CRYL1Q9Y2S2 319 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 DNAJC15Q9Y5T4 150 aa11.67□□□□□ -0.54
LINC01001-201ENST00000526704 A0A0J9YYE9 177 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 ARHGAP10A1A4S6 786 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 LRRC14BA6NHZ5 514 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 TTC36A6NLP5 189 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 BBIP1A8MTZ0 92 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 FAM155AB1AL88 458 aaPredicted RBP11.66□□□□□ -0.54
LINC01001-201ENST00000526704 H3BNH8 94 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 PPP6CO00743 305 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 CDK14O94921 469 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 H6PDO95479 791 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 OR4Q2P0C623 313 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 CKMT2P17540 419 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 CDH2P19022 906 aaPredicted RBP11.66□□□□□ -0.54
LINC01001-201ENST00000526704 FOXA1P55317 472 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 PRAMEP78395 509 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 OR4D1Q15615 310 aa11.66□□□□□ -0.54
LINC01001-201ENST00000526704 KIF19Q2TAC6 998 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms