RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 SF3B4Q15427 424 aaKnown RBP eCLIP5.55□□□□□ -1.529e-6■■■■■ 27.7
COPB1-204ENST00000526191 PLEKHO1Q53GL0 409 aaPredicted RBP5.55□□□□□ -1.52
COPB1-204ENST00000526191 C2CD5Q86YS7 1000 aa5.55□□□□□ -1.52
COPB1-204ENST00000526191 CPXCR1Q8N123 301 aa5.55□□□□□ -1.52
COPB1-204ENST00000526191 GDPD5Q8WTR4 605 aa5.55□□□□□ -1.52
COPB1-204ENST00000526191 COG8Q96MW5 612 aa5.55□□□□□ -1.52
COPB1-204ENST00000526191 STN1Q9H668 368 aaKnown RBP5.55□□□□□ -1.52
COPB1-204ENST00000526191 RASSF1Q9NS23 344 aa5.55□□□□□ -1.52
COPB1-204ENST00000526191 KCNG2Q9UJ96 466 aa5.55□□□□□ -1.52
COPB1-204ENST00000526191 POLR3AO14802 1390 aaPredicted RBP5.55□□□□□ -1.52
COPB1-204ENST00000526191 ADCY9O60503 1353 aa5.55□□□□□ -1.52
COPB1-204ENST00000526191 A0A0U1RQJ8 604 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 KRT86O43790 486 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 SNRNP70P08621 437 aaKnown RBP5.54□□□□□ -1.52
COPB1-204ENST00000526191 CNPP09543 421 aaKnown RBP5.54□□□□□ -1.52
COPB1-204ENST00000526191 WEE2P0C1S8 567 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 HSD3B1P14060 373 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 MYF6P23409 242 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 CCT5P48643 541 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 ST3GAL1Q11201 340 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 DHX34Q14147 1143 aaKnown RBP5.54□□□□□ -1.52
COPB1-204ENST00000526191 KRT81Q14533 505 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 ZNF718Q3SXZ3 478 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 FBXO47Q5MNV8 452 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 ANKRD45Q5TZF3 282 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 LURAP1LQ8IV03 231 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 ANKRD18AQ8IVF6 992 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 CCDC105Q8IYK2 499 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 PGBD5Q8N414 524 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 AADATQ8N5Z0 425 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 ZNF114Q8NC26 417 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 ZMIZ2Q8NF64 920 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 RFWD2Q8NHY2 731 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 ARRDC2Q8TBH0 407 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 TMEM170AQ8WVE7 144 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 TRIB2Q92519 343 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 IGSF21Q96ID5 467 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.54□□□□□ -1.52
COPB1-204ENST00000526191 MROH8Q9H579 483 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 SLC32A1Q9H598 525 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 SPATS2LQ9NUQ6 558 aaKnown RBP5.54□□□□□ -1.52
COPB1-204ENST00000526191 OR6C3Q9NZP0 311 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 IFT80Q9P2H3 777 aaPredicted RBP5.54□□□□□ -1.52
COPB1-204ENST00000526191 TNS2Q63HR2 1409 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 LY75O60449 1722 aa5.54□□□□□ -1.52
COPB1-204ENST00000526191 IGSF1Q8N6C5 1336 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 VWA3AA6NCI4 1184 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 FAM90A7PA6NKC0 464 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 FAM90A22PA8MWA6 464 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 FAM90A12PA8MX19 464 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 FAM90A23PA8MXZ1 464 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 KLK10O43240 276 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 VNN2O95498 520 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 IGKV3-20P01619 116 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 CHRM4P08173 479 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 TFPIP10646 304 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 LIFRP42702 1097 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
COPB1-204ENST00000526191 CXCR3P49682 368 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 SNTA1Q13424 505 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 BIRC3Q13489 604 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 EFR3AQ14156 821 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 DCAF6Q58WW2 860 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 XKR9Q5GH70 373 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 IL20RBQ6UXL0 311 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 PRSS45Q7RTY3 260 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 ZNF329Q86UD4 541 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 DUX5Q96PT3 197 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 PKP4Q99569 1192 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 PYM1Q9BRP8 204 aaKnown RBP5.53□□□□□ -1.52
COPB1-204ENST00000526191 NOD2Q9HC29 1040 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 ANKRD10Q9NXR5 420 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 SAGE1Q9NXZ1 904 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 MDFICQ9P1T7 246 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 MALT1Q9UDY8 824 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 CPSF1Q10570 1443 aaKnown RBP5.53□□□□□ -1.52
COPB1-204ENST00000526191 SLIT3O75094 1523 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 C5P01031 1676 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 QRICH2Q9H0J4 1663 aa5.53□□□□□ -1.52
COPB1-204ENST00000526191 TRPM1Q7Z4N2 1603 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 KIAA1210Q9ULL0 1709 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 NPIPB11E5RHQ5 1161 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 PER2O15055 1255 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 CEP104O60308 925 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 ATP2C2O75185 946 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 DAOP14920 347 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 SSTR2P30874 369 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 FMO4P31512 558 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 PAPOLAP51003 745 aaKnown RBP5.52□□□□□ -1.53
COPB1-204ENST00000526191 DLX5P56178 289 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 ZNF672Q499Z4 452 aaPredicted RBP5.52□□□□□ -1.53
COPB1-204ENST00000526191 SETMARQ53H47 684 aaPredicted RBP5.52□□□□□ -1.53
COPB1-204ENST00000526191 RHBDF2Q6PJF5 856 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 CCDC129Q6ZRS4 1044 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 USP43Q70EL4 1123 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 MOB3CQ70IA8 216 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 RAB40AQ8WXH6 277 aa5.52□□□□□ -1.53
COPB1-204ENST00000526191 CNOT9Q92600 299 aaKnown RBP5.52□□□□□ -1.53
COPB1-204ENST00000526191 STAMQ92783 540 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms