RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 BOLA3Q53S33 107 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 ARHGAP40Q5TG30 622 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 TMPRSS9Q7Z410 1059 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 TAF8Q7Z7C8 310 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 HEATR4Q86WZ0 1026 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 NRROSQ86YC3 692 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 ATPAF2Q8N5M1 289 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 Q8N9G6 341 aaPredicted RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 ATL2Q8NHH9 583 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 WDR36Q8NI36 951 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 LRRN4Q8WUT4 740 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 CPLX3Q8WVH0 158 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 TEKT4Q8WW24 435 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 GFM1Q96RP9 751 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 LRRN3Q9H3W5 708 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 WDR26Q9H7D7 661 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 EPB41L5Q9HCM4 733 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 NT5MQ9NPB1 228 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 ATXN7L1Q9ULK2 861 aaPredicted RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 NENFQ9UMX5 172 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 RNF215Q9Y6U7 377 aa11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 GCN1Q92616 2671 aaKnown RBP11.83□□□□□ -0.52
CLNS1A-202ENST00000525064 SDK2Q58EX2 2172 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 TEX51A0A1B0GUA7 166 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 GYPCP04921 128 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 SERPING1P05155 500 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 CYP1A2P05177 515 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 PDHA1P08559 390 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 HOXC4P09017 264 aaPredicted RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 RBMS1P29558 406 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 HSPA9P38646 679 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 MMP13P45452 471 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 MAZP56270 477 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 UBASH3AP57075 661 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 TMPRSS3P57727 454 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 POLR2LP62875 67 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 HLTFQ14527 1009 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 FAM182AQ5T1J6 154 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 CERCAMQ5T4B2 595 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 NCBP2-AS2Q69YL0 99 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 SPECC1LQ69YQ0 1117 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 OGFOD3Q6PK18 319 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 CLEC14AQ86T13 490 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 CCNJLQ8IV13 435 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 CBARPQ8N350 705 aaPredicted RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 FAM46DQ8NEK8 389 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 WDR48Q8TAF3 677 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 PIH1D2Q8WWB5 315 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 SCG3Q8WXD2 468 aaKnown RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 GRAMD1AQ96CP6 724 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 DTD2Q96FN9 168 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 LIN37Q96GY3 246 aaPredicted RBP11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 IP6K2Q9UHH9 426 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 CD84Q9UIB8 345 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 ST14Q9Y5Y6 855 aa11.82□□□□□ -0.52
CLNS1A-202ENST00000525064 COL6A6A6NMZ7 2263 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 TNFRSF10CO14798 259 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 PGLSO95336 258 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 SOD1P00441 154 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 CEACAM5P06731 702 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 MYCLP1P12525 358 aaPredicted RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 AK4P27144 223 aaPredicted RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 UGT1A5P35504 534 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 ETV5P41161 510 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 INHBCP55103 352 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 TAS2R40P59535 323 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 ZBED6P86452 979 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 CDK3Q00526 305 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 DSC2Q02487 901 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 SRSF6Q13247 344 aaKnown RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 CLN3Q13286 438 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 DPYSL3Q14195 570 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 KRT81Q14533 505 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 C14orf28Q4W4Y0 310 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 BROXQ5VW32 411 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 Q6ZVL8 140 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 RAB11FIP2Q7L804 512 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 SPRED1Q7Z699 444 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 FBXO39Q8N4B4 442 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 TEX26Q8N6G2 289 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 ZNF564Q8TBZ8 553 aaPredicted RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 FAM71BQ8TC56 605 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 PATE1Q8WXA2 126 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 SYN2Q92777 582 aaPredicted RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 MCCC1Q96RQ3 725 aaPredicted RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 SEMA3CQ99985 751 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 PACSIN1Q9BY11 444 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 TEX101Q9BY14 249 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 FRMD8Q9BZ67 464 aaPredicted RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 SEMA4CQ9C0C4 833 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 CARS2Q9HA77 564 aaKnown RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 SPATS2LQ9NUQ6 558 aaKnown RBP11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 CAPN11Q9UMQ6 739 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 PHTF1Q9UMS5 762 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 PLEKHM1Q9Y4G2 1056 aa11.81□□□□□ -0.52
CLNS1A-202ENST00000525064 GOLGA6CA6NDK9 693 aa11.8□□□□□ -0.52
CLNS1A-202ENST00000525064 GOLGA6BA6NDN3 693 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms