RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CSO75390 466 aaKnown RBP18.57■□□□□ 0.56
CAPN1-203ENST00000525013 PDHA1P08559 390 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 CES1P23141 567 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 TRIM23P36406 574 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 ETV3P41162 512 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 EPHB1P54762 984 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 SLC10A2Q12908 348 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-203ENST00000525013 TBX2Q13207 712 aaPredicted RBP18.57■□□□□ 0.56
CAPN1-203ENST00000525013 RTP5Q14D33 572 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 CDCP2Q5VXM1 449 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 KCTD16Q68DU8 428 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 LVRNQ6Q4G3 990 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 HSD11B1LQ7Z5J1 315 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 TSPAN33Q86UF1 283 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 PELI3Q8N2H9 469 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 TPCN2Q8NHX9 752 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 HNRNPLLQ8WVV9 542 aaKnown RBP18.57■□□□□ 0.56
CAPN1-203ENST00000525013 PIH1D2Q8WWB5 315 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 NAT6Q93015 286 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 DCBLD2Q96PD2 775 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 LGR4Q9BXB1 951 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 FGF22Q9HCT0 170 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 MRPL40Q9NQ50 206 aaKnown RBP18.57■□□□□ 0.56
CAPN1-203ENST00000525013 KCTD5Q9NXV2 234 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 DTLQ9NZJ0 730 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 GPR34Q9UPC5 381 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 LHX6Q9UPM6 363 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 GPSM3Q9Y4H4 160 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 PCDHB1Q9Y5F3 818 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 HEY1Q9Y5J3 304 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 DGKBQ9Y6T7 804 aa18.57■□□□□ 0.56
CAPN1-203ENST00000525013 PDE2AO00408 941 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-203ENST00000525013 MTA2O94776 668 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 JCHAINP01591 159 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 KRT1P04264 644 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 HOXC4P09017 264 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-203ENST00000525013 TGM2P21980 687 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 LHCGRP22888 699 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 PERM1Q5SV97 790 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 SARM1Q6SZW1 724 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 Q6ZVL8 140 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 TAF8Q7Z7C8 310 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 CCDC13Q8IYE1 715 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 SDR16C5Q8N3Y7 309 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 KYQ8NBH2 561 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 FATE1Q969F0 183 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 DTD2Q96FN9 168 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 SMIM14Q96QK8 99 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 MCCC1Q96RQ3 725 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-203ENST00000525013 RBM15Q96T37 977 aaKnown RBP eCLIP18.56■□□□□ 0.56
CAPN1-203ENST00000525013 LGMNQ99538 433 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 SUDS3Q9H7L9 328 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-203ENST00000525013 SYNDIG1Q9H7V2 258 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 CYP4F12Q9HCS2 524 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 PHPT1Q9NRX4 125 aaPredicted RBP18.56■□□□□ 0.56
CAPN1-203ENST00000525013 AMACRQ9UHK6 382 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 INTUQ9ULD6 942 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 CHKBQ9Y259 395 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 HYOU1Q9Y4L1 999 aa18.56■□□□□ 0.56
CAPN1-203ENST00000525013 A0A0U1RQS6 177 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 KCNK1O00180 336 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 TNFRSF10CO14798 259 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 SPOPO43791 374 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 BRINP1O60477 761 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 USP12O75317 370 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 HLA-DQB2P05538 268 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 MYCLP1P12525 358 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-203ENST00000525013 CA4P22748 312 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 NOP2P46087 812 aaKnown RBP18.55■□□□□ 0.56
CAPN1-203ENST00000525013 ALG1LQ6GMV1 187 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 HEATR4Q86WZ0 1026 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 ARL10Q8N8L6 244 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 RNF25Q96BH1 459 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-203ENST00000525013 HDAC11Q96DB2 347 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 PPIL1Q9Y3C6 166 aa18.55■□□□□ 0.56
CAPN1-203ENST00000525013 CACNA1GO43497 2377 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 LAMA5O15230 3695 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 A0A0J9YYE9 177 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 PSMD11O00231 422 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 APOL1O14791 398 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 FZD6O60353 706 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 TRBC1P01850 177 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 SLC1A1P43005 524 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 MAGEA1P43355 309 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 NIPAL4Q0D2K0 466 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 AP1B1Q10567 949 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 IHHQ14623 411 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 COL28A1Q2UY09 1125 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 LRRC38Q5VT99 294 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 LRRC66Q68CR7 880 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 RAET1GQ6H3X3 334 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 RFX6Q8HWS3 928 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 RHOT1Q8IXI2 618 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 CBARPQ8N350 705 aaPredicted RBP18.54■□□□□ 0.56
CAPN1-203ENST00000525013 PLD5Q8N7P1 536 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 TC2NQ8N9U0 490 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 FAM46DQ8NEK8 389 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 ARRDC2Q8TBH0 407 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 CCDC3Q9BQI4 270 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 TMEM168Q9H0V1 697 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms