RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	PFKL	P17858	780 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	GLDC	P23378	1020 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	SLC26A3	P40879	764 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CSK	P41240	450 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CPA2	P48052	419 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	IDH3A	P50213	366 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	SGSH	P51688	502 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	COPA	P53621	1224 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	NAGLU	P54802	743 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CYP4F8	P98187	520 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	RAD51	Q06609	339 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	MSLN	Q13421	630 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ACAP2	Q15057	778 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	GEN1	Q17RS7	908 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	MPPE1	Q53F39	396 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	TECRL	Q5HYJ1	363 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ARMC12	Q5T9G4	340 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ELMSAN1	Q6PJG2	1045 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	SPATA31D4	Q6ZUB0	917 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	OTOP2	Q7RTS6	562 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	TMPRSS6	Q8IU80	811 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CEP97	Q8IW35	865 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CENPL	Q8N0S6	344 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF781	Q8N8C0	355 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ACVR1C	Q8NER5	493 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	GPR150	Q8NGU9	434 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	MAGEC3	Q8TD91	643 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	HEXDC	Q8WVB3	486 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	TBATA	Q96M53	351 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	GAS2L1	Q99501	681 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	SORT1	Q99523	831 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	EBF4	Q9BQW3	602 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	C1QTNF1	Q9BXJ1	281 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	GPR63	Q9BZJ6	419 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZBP1	Q9H171	429 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	MMADHC	Q9H3L0	296 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	SYTL2	Q9HCH5	934 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	NLE1	Q9NVX2	485 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	POLR3B	Q9NW08	1133 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	TAS2R13	Q9NYV9	303 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	CRYL1	Q9Y2S2	319 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	YBX2	Q9Y2T7	364 aa	Known RBP	10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	COMMD10	Q9Y6G5	202 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	MYOF	Q9NZM1	2061 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	PIKFYVE	Q9Y2I7	2098 aa		10.78	□□□□□ -0.68
SPIDR-222	ENST00000524006	OR51F1	A6NGY5	319 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006		E5RI56	91 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006		H3BNC9	293 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	TNFRSF10A	O00220	468 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	SCAMP3	O14828	347 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	BUD23	O43709	281 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CRCP	O75575	148 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CSPG5	O95196	566 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CXCL14	O95715	111 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	FGB	P02675	491 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	S100B	P04271	92 aa	Predicted RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	PRKCG	P05129	697 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	TFEB	P19484	476 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	AOC1	P19801	751 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	GABRB3	P28472	473 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CTNNB1	P35222	781 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	TTPA	P49638	278 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	ARSD	P51689	593 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	ZNF140	P52738	457 aa	Predicted RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	STC1	P52823	247 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	DNAJB13	P59910	316 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	ACVR1	Q04771	509 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	UBAP2L	Q14157	1087 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CYTH1	Q15438	398 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CTC1	Q2NKJ3	1217 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	ZRANB3	Q5FWF4	1079 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CES4A	Q5XG92	561 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	TXNDC8	Q6A555	127 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CXorf57	Q6NSI4	855 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	LINGO4	Q6UY18	593 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	STK40	Q8N2I9	435 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	MAB21L3	Q8N8X9	362 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	OR4K2	Q8NGD2	314 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	OR13C4	Q8NGS5	318 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	BHMT	Q93088	406 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CNDP1	Q96KN2	507 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	TCF12	Q99081	682 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	OLFM1	Q99784	485 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CORO1B	Q9BR76	489 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	UNK	Q9C0B0	810 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	C20orf27	Q9GZN8	174 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	RNF38	Q9H0F5	515 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	MTIF3	Q9H2K0	278 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	NKX2-4	Q9H2Z4	354 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	COG4	Q9H9E3	785 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	RC3H2	Q9HBD1	1191 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CYP4F12	Q9HCS2	524 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	CD248	Q9HCU0	757 aa		10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	KIAA1522	Q9P206	1035 aa	Predicted RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	TRMT6	Q9UJA5	497 aa	Known RBP	10.77	□□□□□ -0.69
SPIDR-222	ENST00000524006	SLC25A13	Q9UJS0	675 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms