RNA–Protein interactions for RNA: ENST00000522389.5

CA1-215, Transcript of carbonic anhydrase 1, human

TSL 3 BASIC

Gene CA1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CA1-215	ENST00000522389	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.27	□□□□□ -1.73
CA1-215	ENST00000522389	C6orf141	Q5SZD1	244 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	SLC36A4	Q6YBV0	504 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.27	□□□□□ -1.73
CA1-215	ENST00000522389	ARHGAP12	Q8IWW6	846 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	C17orf53	Q8N3J3	647 aa	Predicted RBP	4.27	□□□□□ -1.73
CA1-215	ENST00000522389	AADAT	Q8N5Z0	425 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	NEK9	Q8TD19	979 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	ARHGEF26	Q96DR7	871 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	C1orf74	Q96LT6	269 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	LRFN5	Q96NI6	719 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	SLITRK1	Q96PX8	696 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	PCGF1	Q9BSM1	259 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	C1QTNF5	Q9BXJ0	243 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	HINT3	Q9NQE9	182 aa	Known RBP	4.27	□□□□□ -1.73
CA1-215	ENST00000522389	CNGB3	Q9NQW8	809 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	MTMR6	Q9Y217	621 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	STON1	Q9Y6Q2	735 aa		4.27	□□□□□ -1.73
CA1-215	ENST00000522389	RUSC2	Q8N2Y8	1516 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	C1orf226	A1L170	272 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389		A6NCN8	305 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	FAM90A10P	A6NDY2	464 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	HSPA12A	O43301	675 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	KCNJ13	O60928	360 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	STX2	P32856	288 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	CDKN2A	P42771	156 aa	Known RBP	4.26	□□□□□ -1.73
CA1-215	ENST00000522389	SNX16	P57768	344 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	PRAME	P78395	509 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	NIPAL4	Q0D2K0	466 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	HLF	Q16534	295 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	USP41	Q3LFD5	358 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	RILPL1	Q5EBL4	403 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	FAM205BP	Q63HN1	556 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	ANKRD54	Q6NXT1	300 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	MTSS1L	Q765P7	747 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	PELI3	Q8N2H9	469 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	SPATA6L	Q8N4H0	392 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	WASF1	Q92558	559 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	MTBP	Q96DY7	904 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	RRNAD1	Q96FB5	475 aa	Known RBP	4.26	□□□□□ -1.73
CA1-215	ENST00000522389	SLC41A2	Q96JW4	573 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	FAM110A	Q9BQ89	295 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	NTPCR	Q9BSD7	190 aa	Known RBP	4.26	□□□□□ -1.73
CA1-215	ENST00000522389	PPP1R3E	Q9H7J1	279 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.26	□□□□□ -1.73
CA1-215	ENST00000522389	ABI3	Q9P2A4	366 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	SLC9A2	Q9UBY0	812 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	ADD3	Q9UEY8	706 aa	Known RBP	4.26	□□□□□ -1.73
CA1-215	ENST00000522389	VPS28	Q9UK41	221 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389	TTC7A	Q9ULT0	858 aa	Predicted RBP	4.26	□□□□□ -1.73
CA1-215	ENST00000522389	SNX9	Q9Y5X1	595 aa		4.26	□□□□□ -1.73
CA1-215	ENST00000522389		A0A1W2PQF6	199 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	TAF4	O00268	1085 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	VILL	O15195	856 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	OAZ2	O95190	189 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	ACAA1	P09110	424 aa	Predicted RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	HOXC6	P09630	235 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	ITGB8	P26012	769 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	HNRNPH1	P31943	449 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	METAP2	P50579	478 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	CDH8	P55286	799 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	MC1R	Q01726	317 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	CRYZ	Q08257	329 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	SHB	Q15464	509 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	TDRD12	Q587J7	1177 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	GGNBP1	Q5YKI7	109 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	SIGIRR	Q6IA17	410 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	METTL2B	Q6P1Q9	378 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	PQLC2	Q6ZP29	291 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	CHST9	Q7L1S5	443 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	FASTKD5	Q7L8L6	764 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	WDR63	Q8IWG1	891 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	CREB3L4	Q8TEY5	395 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	TMED6	Q8WW62	240 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	RND1	Q92730	232 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	METTL2A	Q96IZ6	378 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	SLC25A33	Q9BSK2	321 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	MMTAG2	Q9BU76	263 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	MAK16	Q9BXY0	300 aa	Known RBP	4.25	□□□□□ -1.73
CA1-215	ENST00000522389	SEZ6L	Q9BYH1	1024 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	GHITM	Q9H3K2	345 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	OCIAD1	Q9NX40	245 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	TBC1D29	Q9UFV1	150 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	GPR34	Q9UPC5	381 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	SESN1	Q9Y6P5	492 aa		4.25	□□□□□ -1.73
CA1-215	ENST00000522389	SOX30	O94993	753 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	EGF	P01133	1207 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	RB1	P06400	928 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	SNHG28	P0DPA3	235 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	TMEM11	P17152	192 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	ALOX12	P18054	663 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	SSTR2	P30874	369 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	HTR6	P50406	440 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	LINC00205	P59089	165 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	CTF1	Q16619	201 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	MEA1	Q16626	185 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	CDON	Q4KMG0	1287 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	XKR9	Q5GH70	373 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	PAPPA-AS1	Q5QFB9	102 aa		4.24	□□□□□ -1.73
CA1-215	ENST00000522389	WDR73	Q6P4I2	378 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms