RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 DPEP2Q9H4A9 486 aa19.67■□□□□ 0.74
PABPC1-215ENST00000520804 KCTD5Q9NXV2 234 aa19.67■□□□□ 0.74
PABPC1-215ENST00000520804 PHTF1Q9UMS5 762 aa19.67■□□□□ 0.74
PABPC1-215ENST00000520804 PRSS38A1L453 326 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 B4DGG1 531 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 HEXIM1O94992 359 aaKnown RBP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 MYCLP1P12525 358 aaPredicted RBP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 LHCGRP22888 699 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 NFKBIAP25963 317 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 SERPINB6P35237 376 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 CDH6P55285 790 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 CFHR1Q03591 330 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 TRAF2Q12933 501 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 CLN3Q13286 438 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 HLTFQ14527 1009 aaKnown RBP eCLIP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 TAF1BQ53T94 588 aaPredicted RBP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 TDRD12Q587J7 1177 aaKnown RBP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 RALGPS1Q5JS13 557 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 CBARPQ8N350 705 aaPredicted RBP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 ZNF843Q8N446 348 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 ATPAF2Q8N5M1 289 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 NIPA2Q8N8Q9 360 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 Q8N9G6 341 aaPredicted RBP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 NSMCE1Q8WV22 266 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 FUCA2Q9BTY2 467 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 TEX101Q9BY14 249 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 THAP2Q9H0W7 228 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 PCDH18Q9HCL0 1135 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 MOSPD1Q9UJG1 213 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 PCDHGA7Q9Y5G6 932 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 BZW2Q9Y6E2 419 aaKnown RBP19.66■□□□□ 0.74
PABPC1-215ENST00000520804 RNF215Q9Y6U7 377 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 MGAQ8IWI9 3026 aa19.66■□□□□ 0.74
PABPC1-215ENST00000520804 K7ENP7 123 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 CYP2A6P11509 494 aaPredicted RBP19.65■□□□□ 0.74
PABPC1-215ENST00000520804 UGT1A5P35504 534 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 MMP13P45452 471 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 MAXP61244 160 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 SLC25A11Q02978 314 aaKnown RBP19.65■□□□□ 0.74
PABPC1-215ENST00000520804 MARC1Q5VT66 337 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 DENND2CQ68D51 928 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 SPECC1LQ69YQ0 1117 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 INO80CQ6PI98 192 aaPredicted RBP19.65■□□□□ 0.74
PABPC1-215ENST00000520804 HSD11B1LQ7Z5J1 315 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 SPRED1Q7Z699 444 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 HEATR4Q86WZ0 1026 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 SYN2Q92777 582 aaPredicted RBP19.65■□□□□ 0.74
PABPC1-215ENST00000520804 DTD2Q96FN9 168 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 BTBD6Q96KE9 485 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 CARS2Q9HA77 564 aaKnown RBP19.65■□□□□ 0.74
PABPC1-215ENST00000520804 PHPT1Q9NRX4 125 aaPredicted RBP19.65■□□□□ 0.74
PABPC1-215ENST00000520804 LRIT1Q9P2V4 623 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 IP6K2Q9UHH9 426 aa19.65■□□□□ 0.74
PABPC1-215ENST00000520804 ATXN7L1Q9ULK2 861 aaPredicted RBP19.65■□□□□ 0.74
PABPC1-215ENST00000520804 A0A1W2PQJ5 194 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 NPIPB15A6NHN6 443 aaPredicted RBP19.64■□□□□ 0.73
PABPC1-215ENST00000520804 PSMD11O00231 422 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 NUDT21O43809 227 aaKnown RBP19.64■□□□□ 0.73
PABPC1-215ENST00000520804 PGLSO95336 258 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 CEACAM5P06731 702 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 SLC5A2P31639 672 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 ETV3P41162 512 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 ZFP36L1Q07352 338 aaKnown RBP19.64■□□□□ 0.73
PABPC1-215ENST00000520804 KIAA1524Q8TCG1 905 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 GPBAR1Q8TDU6 330 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 TTC9Q92623 222 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 SCRN2Q96FV2 425 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 MCCC1Q96RQ3 725 aaPredicted RBP19.64■□□□□ 0.73
PABPC1-215ENST00000520804 FRMD8Q9BZ67 464 aaPredicted RBP19.64■□□□□ 0.73
PABPC1-215ENST00000520804 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.64■□□□□ 0.73
PABPC1-215ENST00000520804 RCOR3Q9P2K3 495 aaPredicted RBP19.64■□□□□ 0.73
PABPC1-215ENST00000520804 ANAPC7Q9UJX3 599 aa19.64■□□□□ 0.73
PABPC1-215ENST00000520804 GCN1Q92616 2671 aaKnown RBP19.63■□□□□ 0.73
PABPC1-215ENST00000520804 FUCA1P04066 466 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 SERPING1P05155 500 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 HGFP14210 728 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 CCNB1P14635 433 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 IL4RP24394 825 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 TEAD1P28347 426 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 PBX1P40424 430 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 CDK3Q00526 305 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 ARHGEF7Q14155 803 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 KRT81Q14533 505 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 ARMC12Q5T9G4 340 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 CCDC81Q6ZN84 652 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 C17orf82Q86X59 251 aaPredicted RBP19.63■□□□□ 0.73
PABPC1-215ENST00000520804 TEX26Q8N6G2 289 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 NUP85Q9BW27 656 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 GSDMCQ9BYG8 508 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 SPATS2LQ9NUQ6 558 aaKnown RBP19.63■□□□□ 0.73
PABPC1-215ENST00000520804 TRNAU1APQ9NX07 287 aaKnown RBP19.63■□□□□ 0.73
PABPC1-215ENST00000520804 ACSL6Q9UKU0 697 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 PPIL1Q9Y3C6 166 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 LOXL2Q9Y4K0 774 aa19.63■□□□□ 0.73
PABPC1-215ENST00000520804 KALRNO60229 2985 aa19.62■□□□□ 0.73
PABPC1-215ENST00000520804 A0A087X0T9 212 aa19.62■□□□□ 0.73
PABPC1-215ENST00000520804 CAPN8A6NHC0 703 aa19.62■□□□□ 0.73
PABPC1-215ENST00000520804 CYP1A2P05177 515 aa19.62■□□□□ 0.73
PABPC1-215ENST00000520804 JMJD7P0C870 316 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms