RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 RUNX3Q13761 415 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 ARHGEF7Q14155 803 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 PTK2BQ14289 1009 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 PGS1Q32NB8 556 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 VWA2Q5GFL6 755 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 VWA5B1Q5TIE3 1220 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 ARHGEF16Q5VV41 709 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 KRT28Q7Z3Y7 464 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 RNF113BQ8IZP6 322 aaKnown RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 CLASRPQ8N2M8 674 aaKnown RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 PPM1KQ8N3J5 372 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 AQP11Q8NBQ7 271 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SRFBP1Q8NEF9 429 aaKnown RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SRSF12Q8WXF0 261 aaKnown RBP-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 RND1Q92730 232 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SPSB4Q96A44 273 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 LINGO1Q96FE5 620 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLC35A4Q96G79 324 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 MPHOSPH8Q99549 860 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 HEXA-AS1Q9H8Q6 139 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SFXN1Q9H9B4 322 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 SMURF2Q9HAU4 748 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 PANK4Q9NVE7 773 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 FBXL17Q9UF56 701 aa-0.91□□□□□ -2.56
RNU6-539P-201ENST00000516665 A0A1W2PQM1 296 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 ASB14A6NK59 587 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLC16A6O15403 523 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF861PO60384 105 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 CBR3O75828 277 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 IGFBP2P18065 325 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 PRKCHP24723 683 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 FASP25445 335 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 CORO1AP31146 461 aaKnown RBP-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 KIR2DS4P43632 304 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 CLCNKBP51801 687 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 PUM3Q15397 648 aaKnown RBP-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 Q1RN00 199 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 TTC31Q49AM3 519 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 FAM171A1Q5VUB5 890 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 CCDC144NLQ6NUI1 221 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF836Q6ZNA1 936 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 INTS8Q75QN2 995 aaKnown RBP-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 TRABD2AQ86V40 505 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 TMEM178AQ8NBL3 297 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 ADPRHL1Q8NDY3 354 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 LRRC15Q8TF66 581 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 KBTBD7Q8WVZ9 684 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLC45A3Q96JT2 553 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 FAM167AQ96KS9 214 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 COL21A1Q96P44 957 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 RTP3Q9BQQ7 232 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 TRIM54Q9BYV2 358 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 ING2Q9H160 280 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 MCM9Q9NXL9 1143 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 ZNF223Q9UK11 482 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 ACSL5Q9ULC5 683 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 AMDHD2Q9Y303 409 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 JRKLQ9Y4A0 524 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 MST1RQ04912 1400 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 FLT1P17948 1338 aa-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 COL5A3P25940 1745 aaPredicted RBP-0.92□□□□□ -2.56
RNU6-539P-201ENST00000516665 GIMAP1-GIMAP5A0A087WTJ2 511 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 RAB27BO00194 218 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 WNT9BO14905 357 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 DEDDO75618 318 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 BCL10O95999 233 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 RNASE2P10153 161 aaKnown RBP-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 RPS2P15880 293 aaKnown RBP-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 EGR1P18146 543 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 MSH3P20585 1137 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 CD72P21854 359 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 VAMP1P23763 118 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 NR2C2P49116 596 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 HERV-K104P61576 105 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 LPIN1Q14693 890 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 NR1D2Q14995 579 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 UAP1L1Q3KQV9 507 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 MOGAT2Q3SYC2 334 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 GPATCH4Q5T3I0 446 aaKnown RBP-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLC30A9Q6PML9 568 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 REG3GQ6UW15 175 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 RAD9BQ6WBX8 426 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 KRBA2Q6ZNG9 492 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 TMTC1Q8IUR5 882 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 CKAP2LQ8IYA6 745 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 EXD1Q8NHP7 514 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 TBC1D22AQ8WUA7 517 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 LEO1Q8WVC0 666 aaPredicted RBP-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 STAG1Q8WVM7 1258 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 SLCO2A1Q92959 643 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 IL22RA2Q969J5 263 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 AHCYL2Q96HN2 611 aaKnown RBP-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 USP28Q96RU2 1077 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 KRT12Q99456 494 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 PIP5K1AQ99755 562 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 DPH1Q9BZG8 443 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 P2RY12Q9H244 342 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 IFT22Q9H7X7 185 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 NOD2Q9HC29 1040 aa-0.93□□□□□ -2.56
RNU6-539P-201ENST00000516665 Q9N2J8 555 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms