RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 ZNF177Q13360 481 aaPredicted RBP14.86□□□□□ -0.03
NUP54-217ENST00000514987 PDAP1Q13442 181 aaKnown RBP14.86□□□□□ -0.03
NUP54-217ENST00000514987 PPM1LQ5SGD2 360 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 TMEM198Q66K66 360 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 ZNF783Q6ZMS7 281 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 CLYBLQ8N0X4 340 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 LRRC43Q8N309 656 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 FBXO22Q8NEZ5 403 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 CD99L2Q8TCZ2 262 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 TOP1MTQ969P6 601 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 CDKN2AIPNLQ96HQ2 116 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 ZNF512Q96ME7 567 aaPredicted RBP14.86□□□□□ -0.03
NUP54-217ENST00000514987 UNKQ9C0B0 810 aaKnown RBP14.86□□□□□ -0.03
NUP54-217ENST00000514987 CWH43Q9H720 699 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 PDP2Q9P2J9 529 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 TMCO1Q9UM00 188 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 CRYL1Q9Y2S2 319 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 KCTD3Q9Y597 815 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 ARL5AQ9Y689 179 aa14.86□□□□□ -0.03
NUP54-217ENST00000514987 ZFP37Q9Y6Q3 630 aaPredicted RBP14.86□□□□□ -0.03
NUP54-217ENST00000514987 TBKBP1A7MCY6 615 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 TMEM233B4DJY2 109 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 H3BNC9 293 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PSMD12O00232 456 aaPredicted RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 SUPT7LO94864 414 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PARNO95453 639 aaKnown RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 RHOCP08134 193 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 FGF4P08620 206 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ENO3P13929 434 aaPredicted RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 RAG1P15918 1043 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 CDC25CP30307 473 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SLC6A4P31645 630 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PPP3CCP48454 512 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ACADVLP49748 655 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ZNF140P52738 457 aaPredicted RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 ATP6V0D1P61421 351 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 FLOT2Q14254 428 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 GALNT3Q14435 633 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ARHGEF6Q15052 776 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 USP41Q3LFD5 358 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ZNF549Q6P9A3 640 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 TMEM207Q6UWW9 146 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 HACD2Q6Y1H2 254 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 CRIPAKQ8N1N5 446 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 CFAP52Q8N1V2 620 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PIP4K2CQ8TBX8 421 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 GDPD5Q8WTR4 605 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PHF21BQ96EK2 531 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 BTBD9Q96Q07 612 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SPON2Q9BUD6 331 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SLC25A23Q9BV35 468 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ADGRE3Q9BY15 652 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 CCDC68Q9H2F9 335 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SCUBE2Q9NQ36 999 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 TAS2R13Q9NYV9 303 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 EPS15L1Q9UBC2 864 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ANKRD36A6QL64 1941 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 A0A1B0GVM2 712 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 ZNF840PA6NDX5 716 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 OR51F1A6NGY5 319 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 H3BNX3 289 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 TRIM38O00635 465 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SKAP2O75563 359 aaPredicted RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 BCAS2O75934 225 aaPredicted RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 SLC4A1P02730 911 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SNRPB2P08579 225 aaKnown RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 ZNF37AP17032 561 aaPredicted RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 CD9P21926 228 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 GATMP50440 423 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PRMT2P55345 433 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 STX1BP61266 288 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PTK2BQ14289 1009 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 FASTKQ14296 549 aaKnown RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 TRIP10Q15642 601 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 UNC50Q53HI1 259 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 LDB1Q86U70 411 aaPredicted RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 FAM126BQ8IXS8 530 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 PQLC1Q8N2U9 271 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 RIN3Q8TB24 985 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SHKBP1Q8TBC3 707 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 STAG3L4Q8TBR4 150 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SPDL1Q96EA4 605 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 MYEOVQ96EZ4 313 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 DERL2Q9GZP9 239 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 TRPM5Q9NZQ8 1165 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 AFF4Q9UHB7 1163 aaKnown RBP14.85□□□□□ -0.03
NUP54-217ENST00000514987 ADAMTS6Q9UKP5 1117 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 SARDHQ9UL12 918 aa14.85□□□□□ -0.03
NUP54-217ENST00000514987 A0A0D9SEW6 157 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 DPPA5A6NC42 116 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 SYCE1LA8MT33 242 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 CCL22O00626 93 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 VPS4BO75351 444 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 SORBS2O94875 1100 aaKnown RBP14.84□□□□□ -0.03
NUP54-217ENST00000514987 PYGLP06737 847 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 CR2P20023 1033 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 THOP1P52888 689 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 PLK1P53350 603 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 RAD51Q06609 339 aa14.84□□□□□ -0.03
NUP54-217ENST00000514987 GPNMBQ14956 572 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms